RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 HIVEP1P15822 2718 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 COL4A2P08572 1712 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.98□□□□□ -2.09
VPS4B-203ENST00000588323 IGHV5-10-1A0A0J9YXX1 117 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 A0A1B0GV90 55 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 A0A1B0GVG6 124 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 FAM25AB3EWG3 89 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 FAM25CB3EWG5 89 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 FAM25GB3EWG6 89 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 CXCR6O00574 342 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 PLIN3O60664 434 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 HPGDSO60760 199 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 CCDC22O60826 627 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 ENTPD6O75354 484 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 MT-CO2P00403 227 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 RLN2P04090 185 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 ISG15P05161 165 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 OR10J4P0C629 311 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 SCGB1A1P11684 91 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 KCNE1P15382 129 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 PSMA1P25786 263 aaKnown RBP1.98□□□□□ -2.09
VPS4B-203ENST00000588323 PSMB5P28074 263 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 HSPA9P38646 679 aaKnown RBP1.98□□□□□ -2.09
VPS4B-203ENST00000588323 CCR2P41597 374 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 GCLMP48507 274 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 TTPAP49638 278 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 RAB13P51153 203 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 CCR6P51684 374 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 STC1P52823 247 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 CRYBA4P53673 196 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 TCL1AP56279 114 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 RAB8AP61006 207 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 CDK5Q00535 292 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 TSNQ15631 228 aaKnown RBP1.98□□□□□ -2.09
VPS4B-203ENST00000588323 TMEM176BQ3YBM2 270 aaPredicted RBP1.98□□□□□ -2.09
VPS4B-203ENST00000588323 ZNF658BQ4V348 819 aaPredicted RBP1.98□□□□□ -2.09
VPS4B-203ENST00000588323 MPV17L2Q567V2 206 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 DNM1P34Q6PK57 102 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 DRAM2Q6UX65 266 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 ANGPTL5Q86XS5 388 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 PHF13Q86YI8 300 aaPredicted RBP1.98□□□□□ -2.09
VPS4B-203ENST00000588323 C10orf107Q8IVU9 208 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 RNF175Q8N4F7 328 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 TMEM156Q8N614 296 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 DRAM1Q8N682 238 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 Q8N976 141 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 LINC01555Q8NAE3 123 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 TMEM161BQ8NDZ6 487 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 TSTD1Q8NFU3 115 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 OR4K2Q8NGD2 314 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 OR5L1Q8NGL2 311 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 OR1J4Q8NGS1 313 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 OR52P1PQ8NH57 321 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 CASTOR1Q8WTX7 329 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 MRAP2Q96G30 205 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 BTF3L4Q96K17 158 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 SMIM8Q96KF7 97 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 PGLYRP3Q96LB9 341 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 OR2A5Q96R48 311 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 SERPINI1Q99574 410 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 APOL4Q9BPW4 351 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 PDCD10Q9BUL8 212 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 GGTLC1Q9BX51 225 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 UGT2B28Q9BY64 529 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 ARL6Q9H0F7 186 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 RPP21Q9H633 154 aaKnown RBP1.98□□□□□ -2.09
VPS4B-203ENST00000588323 SPANXA1Q9NS26 97 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 TAS2R13Q9NYV9 303 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 OR12D3Q9UGF7 316 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 PRO0628Q9UI54 55 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 DKKL1Q9UK85 242 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 FBXO5Q9UKT4 447 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 ZNF337Q9Y3M9 751 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 ANKHD1Q8IWZ3 2542 aaKnown RBP1.98□□□□□ -2.09
VPS4B-203ENST00000588323 CACNA1DQ01668 2161 aa1.98□□□□□ -2.09
VPS4B-203ENST00000588323 NBEAL1Q6ZS30 2694 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 MYO5AQ9Y4I1 1855 aaKnown RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 HIVEP3Q5T1R4 2406 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 FN1P02751 2386 aaKnown RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 TSC2P49815 1807 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 IGHV6-1A0A0B4J1U7 121 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 IGHV1OR15-9A0A0B4J2B8 117 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 A0A1B0GVX0 72 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 A0A1W2PP18 115 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 PQLC2LA1A4F0 135 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 FAM92AA1XBS5 289 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 RBFOX3A6NFN3 312 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 CCDC160A6NGH7 325 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 C11orf94C9JXX5 98 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 FTCDNL1E5RQL4 147 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 M0R1X1 148 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 KCNK1O00180 336 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 AZIN1O14977 448 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 SLC31A1O15431 190 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 KLRC4O43908 158 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 PDE6DO43924 150 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 FADS1O60427 444 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 EIF1BO60739 113 aaKnown RBP1.97□□□□□ -2.09
VPS4B-203ENST00000588323 FOXH1O75593 365 aa1.97□□□□□ -2.09
VPS4B-203ENST00000588323 DHRS3O75911 302 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms