RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 C17orf50Q8WW18 174 aa13.65□□□□□ -0.22
HMG20B-215ENST00000585741 TMEM230Q96A57 120 aa13.65□□□□□ -0.22
HMG20B-215ENST00000585741 A0A1W2PPI3 338 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 H0Y980 276 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 PROP1O75360 226 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 ATG12O94817 140 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 SFT2D2O95562 160 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 OR5AC1P0C628 307 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 FAM106CPP0CH98 169 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 SRD5A1P18405 259 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 CD1BP29016 333 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 RPL30P62888 115 aaKnown RBP13.64□□□□□ -0.23
HMG20B-215ENST00000585741 SRPXP78539 464 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 PPP1R1AQ13522 171 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 LRRC75BQ2VPJ9 315 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 LDLRAD2Q5SZI1 272 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 DHRS7BQ6IAN0 325 aaPredicted RBP13.64□□□□□ -0.23
HMG20B-215ENST00000585741 LYG2Q86SG7 212 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 PDPNQ86YL7 162 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 COQ8AQ8NI60 647 aa13.64□□□□□ -0.23
HMG20B-215ENST00000585741 RNASE11Q8TAA1 199 aaKnown RBP13.64□□□□□ -0.23
HMG20B-215ENST00000585741 H0YJW9 148 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 CRYZL1O95825 349 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 IL5P05113 134 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 PAX6P26367 422 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 LPAR6P43657 344 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 LINC00205P59089 165 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 RPS16P62249 146 aaKnown RBP13.63□□□□□ -0.23
HMG20B-215ENST00000585741 DEFB112Q30KQ8 113 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 SP6Q3SY56 376 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 C9orf139Q6ZV77 190 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 ZNF695Q8IW36 515 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 BCL6BQ8N143 479 aaPredicted RBP13.63□□□□□ -0.23
HMG20B-215ENST00000585741 DYNAPQ8N1N2 210 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 OR5AN1Q8NGI8 311 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 FLYWCH2Q96CP2 140 aaKnown RBP13.63□□□□□ -0.23
HMG20B-215ENST00000585741 GALNT14Q96FL9 552 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 SSX3Q99909 188 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 MEGF9Q9H1U4 602 aa13.63□□□□□ -0.23
HMG20B-215ENST00000585741 C9orf170A2RU37 121 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 SHOXO15266 292 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 CREBL2O60519 120 aaPredicted RBP13.62□□□□□ -0.23
HMG20B-215ENST00000585741 HPRT1P00492 218 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 IGKV1D-33P01593 117 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 IGKV1-33P01594 117 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 VSIG10L2P0DP72 767 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 RPA2P15927 270 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 MECP2P51608 486 aaKnown RBP13.62□□□□□ -0.23
HMG20B-215ENST00000585741 ERVK-16P61578 105 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 DHRS2Q13268 280 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 EIF4EBP1Q13541 118 aaPredicted RBP13.62□□□□□ -0.23
HMG20B-215ENST00000585741 LGI3Q8N145 548 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 UXS1Q8NBZ7 420 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 OR4C13Q8NGP0 309 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 OR2T10Q8NGZ9 312 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 TP53RKQ96S44 253 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 PHB2Q99623 299 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 SEC22CQ9BRL7 303 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 AIFM2Q9BRQ8 373 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 TMEM222Q9H0R3 208 aa13.62□□□□□ -0.23
HMG20B-215ENST00000585741 FAM212BQ9NTI7 297 aaPredicted RBP13.62□□□□□ -0.23
HMG20B-215ENST00000585741 RBFOX2O43251 390 aaKnown RBP eCLIP13.61□□□□□ -0.23
HMG20B-215ENST00000585741 MOSP00540 346 aa13.61□□□□□ -0.23
HMG20B-215ENST00000585741 HRASP01112 189 aa13.61□□□□□ -0.23
HMG20B-215ENST00000585741 SNRNP70P08621 437 aaKnown RBP13.61□□□□□ -0.23
HMG20B-215ENST00000585741 TMEM11P17152 192 aa13.61□□□□□ -0.23
HMG20B-215ENST00000585741 SRSF2Q01130 221 aaKnown RBP13.61□□□□□ -0.23
HMG20B-215ENST00000585741 HNF4GQ14541 408 aa13.61□□□□□ -0.23
HMG20B-215ENST00000585741 TATDN3Q17R31 274 aa13.61□□□□□ -0.23
HMG20B-215ENST00000585741 ZNF431Q8TF32 576 aaPredicted RBP13.61□□□□□ -0.23
HMG20B-215ENST00000585741 DDB2Q92466 427 aa13.61□□□□□ -0.23
HMG20B-215ENST00000585741 HARBI1Q96MB7 349 aa13.61□□□□□ -0.23
HMG20B-215ENST00000585741 SOX21Q9Y651 276 aaPredicted RBP13.61□□□□□ -0.23
HMG20B-215ENST00000585741 MDFIC2A0A1B0GVS7 189 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 SSNA1O43805 119 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 VENTXO95231 258 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 DUS4LO95620 317 aaKnown RBP13.6□□□□□ -0.23
HMG20B-215ENST00000585741 CD24P25063 80 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 UCP1P25874 307 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 AKR1C2P52895 323 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 TMEM187Q14656 261 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 AANATQ16613 207 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 TMEM268Q5VZI3 342 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 LIAT1Q6ZQX7 453 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 THNSL2Q86YJ6 484 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 DMBX1Q8NFW5 382 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 OR52B4Q8NGK2 314 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 OSR1Q8TAX0 266 aaPredicted RBP13.6□□□□□ -0.23
HMG20B-215ENST00000585741 CFHR4Q92496 578 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 AJUBAQ96IF1 538 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 TSNAXQ99598 290 aaKnown RBP13.6□□□□□ -0.23
HMG20B-215ENST00000585741 PLEKHA2Q9HB19 425 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 COMMD9Q9P000 198 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 KIAA1456Q9P272 454 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 PITPNC1Q9UKF7 332 aa13.6□□□□□ -0.23
HMG20B-215ENST00000585741 VGLL3A8MV65 326 aa13.59□□□□□ -0.23
HMG20B-215ENST00000585741 SNRPGP15A8MWD9 76 aa13.59□□□□□ -0.23
HMG20B-215ENST00000585741 H3BUX3 64 aa13.59□□□□□ -0.23
HMG20B-215ENST00000585741 RAMP3O60896 148 aa13.59□□□□□ -0.23
HMG20B-215ENST00000585741 NQO2P16083 231 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms