RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 JMJD8Q96S16 334 aa10.45□□□□□ -0.74
TRIM47-202ENST00000585333 RAB18Q9NP72 206 aa10.45□□□□□ -0.74
TRIM47-202ENST00000585333 F8P00451 2351 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 C9orf170A2RU37 121 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 M0QZK8 103 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 FCGR3BO75015 233 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 MOSP00540 346 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 IFNA21P01568 189 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 OR5AC1P0C628 307 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 NQO2P16083 231 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 REG1BP48304 166 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 PPP1R1AQ13522 171 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 TATDN3Q17R31 274 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 TMEM177Q53S58 311 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 UTF1Q5T230 341 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 RUSC1-AS1Q66K80 236 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 LIN54Q6MZP7 749 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 TMEM86BQ8N661 226 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 LRTM2Q8N967 370 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 ZNF383Q8NA42 475 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 ADAD2Q8NCV1 583 aaKnown RBP10.44□□□□□ -0.74
TRIM47-202ENST00000585333 RNASE11Q8TAA1 199 aaKnown RBP10.44□□□□□ -0.74
TRIM47-202ENST00000585333 MITD1Q8WV92 249 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 SSMEM1Q8WWF3 244 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 RBPMSQ93062 196 aaKnown RBP10.44□□□□□ -0.74
TRIM47-202ENST00000585333 TMEM230Q96A57 120 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 RRNAD1Q96FB5 475 aaKnown RBP10.44□□□□□ -0.74
TRIM47-202ENST00000585333 ZNRD1Q9P1U0 126 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 KIAA1456Q9P272 454 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 FLVCR2Q9UPI3 526 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 POMT1Q9Y6A1 747 aa10.44□□□□□ -0.74
TRIM47-202ENST00000585333 IGHV3OR16-10A0A075B7F0 116 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 A0A0U1RQK1 487 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 C7orf66A4D0T2 115 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 LINC00473A8K010 186 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 SHOXO15266 292 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 PROP1O75360 226 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 VENTXO95231 258 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 CDS2O95674 445 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 CRYZL1O95825 349 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 FGF2P09038 288 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 PRB3Q04118 309 aaPredicted RBP10.43□□□□□ -0.74
TRIM47-202ENST00000585333 EBI3Q14213 229 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 HES1Q14469 280 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 VMA21Q3ZAQ7 101 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 DRAXINQ8NBI3 349 aaPredicted RBP10.43□□□□□ -0.74
TRIM47-202ENST00000585333 ZNF418Q8TF45 676 aaPredicted RBP10.43□□□□□ -0.74
TRIM47-202ENST00000585333 HARBI1Q96MB7 349 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 TMEM56Q96MV1 263 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 SPIN2AQ99865 258 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 SPIN2BQ9BPZ2 258 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 PRDM13Q9H4Q3 707 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 TMED3Q9Y3Q3 217 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 TMEM56-RWDD3S4R434 201 aa10.43□□□□□ -0.74
TRIM47-202ENST00000585333 FAM90A9PA6NNJ1 464 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 SSNA1O43805 119 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 VDAC1P21796 283 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 LPAR6P43657 344 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 AKR1C2P52895 323 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 RPS16P62249 146 aaKnown RBP10.42□□□□□ -0.74
TRIM47-202ENST00000585333 TMEM187Q14656 261 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 C12orf45Q8N5I9 185 aaPredicted RBP10.42□□□□□ -0.74
TRIM47-202ENST00000585333 OR4A5Q8NH83 315 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 CASTOR1Q8WTX7 329 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 GLYATL2Q8WU03 294 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 ASB13Q8WXK3 278 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 CFHR4Q92496 578 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 C5orf30Q96GV9 206 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 TP53RKQ96S44 253 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 SSX3Q99909 188 aa10.42□□□□□ -0.74
TRIM47-202ENST00000585333 HIVEP2P31629 2446 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 A0A0A6YYJ9 748 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 IGKV1D-33P01593 117 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 IGKV1-33P01594 117 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 TMEM11P17152 192 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 RPL30P62888 115 aaKnown RBP10.41□□□□□ -0.74
TRIM47-202ENST00000585333 SUPT4H1P63272 117 aaKnown RBP10.41□□□□□ -0.74
TRIM47-202ENST00000585333 SLC9A3R2Q15599 337 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 POU2AF1Q16633 256 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 TMEM268Q5VZI3 342 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 THOC7Q6I9Y2 204 aaKnown RBP10.41□□□□□ -0.74
TRIM47-202ENST00000585333 DMBX1Q8NFW5 382 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 LSM10Q969L4 123 aaKnown RBP10.41□□□□□ -0.74
TRIM47-202ENST00000585333 R3HDM4Q96D70 268 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 OR51J1Q9H342 316 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 FKBP11Q9NYL4 201 aa10.41□□□□□ -0.74
TRIM47-202ENST00000585333 MARCH11A6NNE9 402 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 SNAPC5O75971 98 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 SNRNP70P08621 437 aaKnown RBP10.4□□□□□ -0.74
TRIM47-202ENST00000585333 FAM157CP0CG43 387 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 VSIG10L2P0DP72 767 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 SLC25A6P12236 298 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 SPNP16150 400 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 UBE2KP61086 200 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 RPL15P61313 204 aaKnown RBP10.4□□□□□ -0.74
TRIM47-202ENST00000585333 CYCSP99999 105 aaKnown RBP10.4□□□□□ -0.74
TRIM47-202ENST00000585333 DIAPH2-AS1Q14236 149 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 DEFB112Q30KQ8 113 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 OR2B11Q5JQS5 317 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 Q6YL49 198 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms