RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 IGHV3OR16-10A0A075B7F0 116 aa13□□□□□ -0.33
SS18-226ENST00000585241 A8MV72 311 aaPredicted RBP13□□□□□ -0.33
SS18-226ENST00000585241 HPRT1P00492 218 aa13□□□□□ -0.33
SS18-226ENST00000585241 SERPINE2P07093 398 aa13□□□□□ -0.33
SS18-226ENST00000585241 TRAPPC2P0DI81 140 aa13□□□□□ -0.33
SS18-226ENST00000585241 TRAPPC2BP0DI82 140 aa13□□□□□ -0.33
SS18-226ENST00000585241 HLA-GP17693 338 aa13□□□□□ -0.33
SS18-226ENST00000585241 CD1BP29016 333 aa13□□□□□ -0.33
SS18-226ENST00000585241 LPAR6P43657 344 aa13□□□□□ -0.33
SS18-226ENST00000585241 RAB13P51153 203 aa13□□□□□ -0.33
SS18-226ENST00000585241 RRAS2P62070 204 aaPredicted RBP13□□□□□ -0.33
SS18-226ENST00000585241 SSX2Q16385 188 aa13□□□□□ -0.33
SS18-226ENST00000585241 RTL8BQ17RB0 113 aa13□□□□□ -0.33
SS18-226ENST00000585241 TMEM177Q53S58 311 aa13□□□□□ -0.33
SS18-226ENST00000585241 OR2B11Q5JQS5 317 aa13□□□□□ -0.33
SS18-226ENST00000585241 BRD3OSQ6XYD6 125 aa13□□□□□ -0.33
SS18-226ENST00000585241 SELENOHQ8IZQ5 122 aaKnown RBP13□□□□□ -0.33
SS18-226ENST00000585241 RBPMSQ93062 196 aaKnown RBP13□□□□□ -0.33
SS18-226ENST00000585241 COMMD9Q9P000 198 aa13□□□□□ -0.33
SS18-226ENST00000585241 WASHC3Q9Y3C0 194 aa13□□□□□ -0.33
SS18-226ENST00000585241 HILPDAQ9Y5L2 63 aa13□□□□□ -0.33
SS18-226ENST00000585241 TEX15Q9BXT5 2789 aa13□□□□□ -0.33
SS18-226ENST00000585241 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 TIMM23O14925 209 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 SSNA1O43805 119 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 S1PR2O95136 353 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 SULT1A3P0DMM9 295 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 SULT1A4P0DMN0 295 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 BCAP31P51572 246 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 DYNLT3P51808 116 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 POU2AF1Q16633 256 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 TUSC1Q2TAM9 212 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 TMEM268Q5VZI3 342 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 MOB3BQ86TA1 216 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 OSR1Q8TAX0 266 aaPredicted RBP12.99□□□□□ -0.33
SS18-226ENST00000585241 MED28Q9H204 178 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 RAB18Q9NP72 206 aa12.99□□□□□ -0.33
SS18-226ENST00000585241 A0A0U1RQK1 487 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 CYSRT1A8MQ03 144 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 VGLL3A8MV65 326 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 CRYZL1O95825 349 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 IGKV1-16P04430 117 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 ARHGDIBP52566 201 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 EBI3Q14213 229 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 LIN54Q6MZP7 749 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 ZNF695Q8IW36 515 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 SLC35G3Q8N808 338 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 SEC22AQ96IW7 307 aa12.98□□□□□ -0.33
SS18-226ENST00000585241 NAV3Q8IVL0 2385 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 hCG_2014768A0A024R1R8 64 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 HMX3A6NHT5 357 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 ATG12O94817 140 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 VENTXO95231 258 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 IGKV1-5P01602 117 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 FBP1P09467 338 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 P0C879 139 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 CD99P14209 185 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 VDAC1P21796 283 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 FCN2Q15485 313 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 AANATQ16613 207 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 C2orf68Q2NKX9 166 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 NMSQ5H8A3 153 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 THNSL2Q86YJ6 484 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 OR11H7Q8NGC8 314 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 OR4C13Q8NGP0 309 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 OR5M8Q8NGP6 311 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 LSM10Q969L4 123 aaKnown RBP12.97□□□□□ -0.33
SS18-226ENST00000585241 FLYWCH2Q96CP2 140 aaKnown RBP12.97□□□□□ -0.33
SS18-226ENST00000585241 RNF5Q99942 180 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 YAE1D1Q9NRH1 226 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 TMED3Q9Y3Q3 217 aa12.97□□□□□ -0.33
SS18-226ENST00000585241 SETXQ7Z333 2677 aaKnown RBP12.96□□□□□ -0.33
SS18-226ENST00000585241 IGHV3-72A0A0B4J1Y9 119 aa12.96□□□□□ -0.33
SS18-226ENST00000585241 H7C2Y5 167 aa12.96□□□□□ -0.33
SS18-226ENST00000585241 NQO2P16083 231 aa12.96□□□□□ -0.33
SS18-226ENST00000585241 PAX6P26367 422 aa12.96□□□□□ -0.33
SS18-226ENST00000585241 FAM120AOSQ5T036 256 aa12.96□□□□□ -0.33
SS18-226ENST00000585241 GGNBP1Q5YKI7 109 aa12.96□□□□□ -0.33
SS18-226ENST00000585241 LYZL2Q7Z4W2 148 aa12.96□□□□□ -0.33
SS18-226ENST00000585241 FAM219AQ8IW50 185 aa12.96□□□□□ -0.33
SS18-226ENST00000585241 PRDM13Q9H4Q3 707 aa12.96□□□□□ -0.33
SS18-226ENST00000585241 A0A0G2JRQ6 117 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 MARCH11A6NNE9 402 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 ADAP1O75689 374 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 LY6G6DO95868 133 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 HRASP01112 189 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 IGLV2-23P01705 113 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 IL6RP08887 468 aaPredicted RBP12.95□□□□□ -0.34
SS18-226ENST00000585241 BRS3P32247 399 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 LGALS7P47929 136 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 SRSF4Q08170 494 aaKnown RBP12.95□□□□□ -0.34
SS18-226ENST00000585241 Q8N6K4 173 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 UXS1Q8NBZ7 420 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 R3HDM4Q96D70 268 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 HARBI1Q96MB7 349 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 AIFM2Q9BRQ8 373 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 MS4A7Q9GZW8 240 aaPredicted RBP12.95□□□□□ -0.34
SS18-226ENST00000585241 MGAT4CQ9UBM8 478 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 MMP24Q9Y5R2 645 aa12.95□□□□□ -0.34
SS18-226ENST00000585241 SOX21Q9Y651 276 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms