RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 MOGAT3Q86VF5 341 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 ZNF525Q8N782 197 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 FAM216AQ8WUB2 273 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 GPHA2Q96T91 129 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 HES4Q9HCC6 221 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 OR1A1Q9P1Q5 309 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 IL19Q9UHD0 177 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 LAMP3Q9UQV4 416 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 RBM7Q9Y580 266 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 PKDREJQ9NTG1 2253 aa12.46□□□□□ -0.41
CDK5RAP3-236ENST00000584991 WNT9BO14905 357 aa12.46□□□□□ -0.42
CDK5RAP3-236ENST00000584991 LY86O95711 162 aa12.46□□□□□ -0.42
CDK5RAP3-236ENST00000584991 IGKV1-5P01602 117 aa12.46□□□□□ -0.42
CDK5RAP3-236ENST00000584991 RNF224P0DH78 156 aa12.46□□□□□ -0.42
CDK5RAP3-236ENST00000584991 SLC35E4Q6ICL7 350 aa12.46□□□□□ -0.42
CDK5RAP3-236ENST00000584991 ZNF645Q8N7E2 425 aa12.46□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CYB561D1Q8N8Q1 229 aa12.46□□□□□ -0.42
CDK5RAP3-236ENST00000584991 LRRC29Q8WV35 223 aa12.46□□□□□ -0.42
CDK5RAP3-236ENST00000584991 RPRMQ9NS64 109 aa12.46□□□□□ -0.42
CDK5RAP3-236ENST00000584991 RALYQ9UKM9 306 aaKnown RBP12.46□□□□□ -0.42
CDK5RAP3-236ENST00000584991 A0A1B0GV50 99 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 TMEM30CPA0ZSE6 113 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 B9A039 149 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 BCL2P10415 239 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 IGFBP2P18065 325 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CEACAM6P40199 344 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 ELOBQ15370 118 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 EFNB3Q15768 340 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 TMEM41BQ5BJD5 291 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 FAM222BQ8WU58 562 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 GALMQ96C23 342 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 DIRC2Q96SL1 478 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 DYNLRB1Q9NP97 96 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 ABCA4P78363 2273 aa12.45□□□□□ -0.42
CDK5RAP3-236ENST00000584991 ARFGEF3Q5TH69 2177 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 OOEPA6NGQ2 149 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 ADH4P08319 380 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 S100PP25815 95 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CCL8P80075 99 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 TMEM14EPQ6UXP3 125 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 RBMS3Q6XE24 437 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 MUC15Q8N387 334 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 DRAM1Q8N682 238 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 WDR61Q9GZS3 305 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CTDSP1Q9GZU7 261 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 GCM1Q9NP62 436 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 HSPB7Q9UBY9 170 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 VAX2Q9UIW0 290 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 PPP1R3CQ9UQK1 317 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 RFNGQ9Y644 331 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 ZNF462Q96JM2 2506 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 DYSFO75923 2080 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 SIRPB1O00241 398 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 MBP02144 154 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 HOXA5P20719 270 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 GATA4P43694 442 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 RND2P52198 227 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 PAX5Q02548 391 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CATR1Q13166 79 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 ZNF787Q6DD87 383 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 ACP7Q6ZNF0 438 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 LILRB2Q8N423 598 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 FGFRL1Q8N441 504 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 KIAA2026Q5HYC2 2103 aa12.44□□□□□ -0.42
CDK5RAP3-236ENST00000584991 A0A1W2PPE3 182 aa12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 IFNL4K9M1U5 179 aa12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 SOX15O60248 233 aa12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CD55P08174 381 aa12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 EGR1P18146 543 aa12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 RPS10P46783 165 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 OR2B8PP59922 312 aa12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 TMEM267Q0VDI3 215 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CIB3Q96Q77 187 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 OR51M1Q9H341 326 aa12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 MS4A5Q9H3V2 200 aa12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 OR14J1Q9UGF5 321 aa12.43□□□□□ -0.42
CDK5RAP3-236ENST00000584991 KMT2BQ9UMN6 2715 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 SRRM5B3KS81 715 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 HAND1O96004 215 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 P0C879 139 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CFHR2P36980 270 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 TNFRSF9Q07011 255 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 TRAT1Q6PIZ9 186 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 GCSAMQ8N6F7 178 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 TAF15Q92804 592 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 KCNS2Q9ULS6 477 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 H3BP45 60 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CLDN34H7C241 214 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CYB5R3P00387 301 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 METTL15P1P0C7V9 234 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 NQO2P16083 231 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 TNFRSF1AP19438 455 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CDX1P47902 265 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 CEBPDP49716 269 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 KIAA0141Q14154 515 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 SMIM21Q3B7S5 101 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 FAM90A2PQ658T7 463 aa12.42□□□□□ -0.42
CDK5RAP3-236ENST00000584991 AGMATQ9BSE5 352 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms