RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SMIM19Q96E16 107 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 PACRGQ96M98 296 aaPredicted RBP1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 FAM215AQ9Y5M1 114 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 CR1P17927 2039 aa1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 TRAV41A0A0B4J266 112 aa1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 C5orf49A4QMS7 147 aa1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 MT-CO2P00403 227 aa1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 LGALS9BQ3B8N2 356 aa1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 Q6ZTI0 123 aa1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 TMEM251Q8N6I4 163 aa1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 EEF1AKMT1Q8WVE0 214 aa1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 TTTY13Q9BZ97 58 aa1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 SPANXB1Q9NS25 103 aaPredicted RBP1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 TAAR3PQ9P1P4 343 aa1.93□□□□□ -2.1
SMARCE1-219ENST00000583294 TMSB15BA0A087X1C1 80 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 TRGV5A0A0B4J1U4 118 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 C1orf232A0A0U1RR37 186 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 OR6C6A6NF89 314 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 GOLGA8KD6RF30 607 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 GOLGA8MH3BSY2 632 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 BHLHE40O14503 412 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 RPL27AP46776 148 aaKnown RBP1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 RBM11P57052 281 aaKnown RBP1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 CXCR4P61073 352 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 RPS24P62847 133 aaKnown RBP1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 EBPQ15125 230 aaKnown RBP1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 PABPC1L2AQ5JQF8 200 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 LRRC28Q86X40 367 aaPredicted RBP1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 SMCR5Q8TEV8 140 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 ANKRD36BP1Q96IX9 119 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 KCTD7Q96MP8 289 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 PLEKHJ1Q9NW61 149 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 BABAM2Q9NXR7 383 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 HHLA3Q9XRX5 114 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 NAV1Q8NEY1 1877 aa1.92□□□□□ -2.1
SMARCE1-219ENST00000583294 RGS12O14924 1447 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 SDK1Q7Z5N4 2213 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 ITGB1BP1O14713 200 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 NPYP01303 97 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 GPX1P07203 203 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 UCHL1P09936 223 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 CD24P25063 80 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 CCR2P41597 374 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 CTBP2P56545 445 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 TBPL1P62380 186 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 DMTNQ08495 405 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 N4BP2L1Q5TBK1 243 aaPredicted RBP1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 OR51T1Q8NGJ9 327 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 OR13C8Q8NGS7 320 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 LHFPL5Q8TAF8 219 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 SPACA4Q8TDM5 124 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 NUMA1Q14980 2115 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 WDR90Q96KV7 1748 aa1.91□□□□□ -2.1
SMARCE1-219ENST00000583294 GRIN2BQ13224 1484 aa1.9□□□□□ -2.11
SMARCE1-219ENST00000583294 DICER1Q9UPY3 1922 aaKnown RBP1.9□□□□□ -2.11
SMARCE1-219ENST00000583294 SLC38A11Q08AI6 406 aa1.9□□□□□ -2.11
SMARCE1-219ENST00000583294 PPP1R1AQ13522 171 aa1.9□□□□□ -2.11
SMARCE1-219ENST00000583294 FAM9CQ8IZT9 166 aa1.9□□□□□ -2.11
SMARCE1-219ENST00000583294 RAB2BQ8WUD1 216 aa1.9□□□□□ -2.11
SMARCE1-219ENST00000583294 TMEM222Q9H0R3 208 aa1.9□□□□□ -2.11
SMARCE1-219ENST00000583294 ZNHIT6Q9NWK9 470 aaKnown RBP1.9□□□□□ -2.11
SMARCE1-219ENST00000583294 KLK5Q9Y337 293 aaPredicted RBP1.9□□□□□ -2.11
SMARCE1-219ENST00000583294 ZNF532Q9HCE3 1301 aa1.9□□□□□ -2.11
SMARCE1-219ENST00000583294 CUL9Q8IWT3 2517 aa1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 A0A087WUU8 490 aa1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 YEATS4O95619 227 aa1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 CDC34P49427 236 aaPredicted RBP1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 HOXC5Q00444 222 aa1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 ZNF791Q3KP31 576 aaPredicted RBP1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 RASSF6Q6ZTQ3 369 aa1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 SPZ1Q9BXG8 430 aa1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 HES4Q9HCC6 221 aa1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 MED13Q9UHV7 2174 aa1.89□□□□□ -2.11
SMARCE1-219ENST00000583294 PIK3R4Q99570 1358 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 ZFHX2Q9C0A1 2572 aaPredicted RBP1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 TYMSP04818 313 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 BLVRAP53004 296 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 TMEM258P61165 79 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 MGAT3Q09327 533 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 CST9Q5W186 159 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 GPHB5Q86YW7 130 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 UBL4BQ8N7F7 174 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 CMTM5Q96DZ9 223 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 DRC3Q9H069 523 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 C15orf41Q9Y2V0 281 aa1.88□□□□□ -2.11
SMARCE1-219ENST00000583294 SIPA1L1O43166 1804 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 C9JCJ5 164 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 HLA-DRAP01903 254 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 REG1AP05451 166 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 COX5BP10606 129 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 PLPPR5Q32ZL2 321 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 OR2T27Q8NH04 317 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 ZNF563Q8TA94 476 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 ZNF675Q8TD23 568 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 LLPHQ9BRT6 129 aaKnown RBP1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 HRASLSQ9HDD0 168 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 REREQ9P2R6 1566 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 RTTNQ86VV8 2226 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms