RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 INPP1P49441 399 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 EIF2B2P49770 351 aaKnown RBP5.81□□□□□ -1.48
CCDC47-205ENST00000582331 DYRK1AQ13627 763 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 MMDQ15546 238 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 RAB11BQ15907 218 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 C2orf76Q3KRA6 126 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 RSBN1Q5VWQ0 802 aaPredicted RBP5.81□□□□□ -1.48
CCDC47-205ENST00000582331 ZNF529Q6P280 563 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 PLET1Q6UQ28 207 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 LINC00322Q6ZN03 302 aaPredicted RBP5.81□□□□□ -1.48
CCDC47-205ENST00000582331 SERPINA12Q8IW75 414 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 OR51A2Q8NGJ7 313 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 OR6F1Q8NGZ6 308 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 OR52I2Q8NH67 350 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 CASTOR1Q8WTX7 329 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 FAM3DQ96BQ1 224 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 S100A16Q96FQ6 103 aaKnown RBP5.81□□□□□ -1.48
CCDC47-205ENST00000582331 SPACA5Q96QH8 159 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 NABP2Q9BQ15 211 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 C7orf50Q9BRJ6 194 aaKnown RBP5.81□□□□□ -1.48
CCDC47-205ENST00000582331 KRTAP9-9Q9BYP9 154 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 AUNIPQ9H7T9 357 aa5.81□□□□□ -1.48
CCDC47-205ENST00000582331 FOXA2Q9Y261 457 aaPredicted RBP5.81□□□□□ -1.48
CCDC47-205ENST00000582331 IGHV7-81A0A0B4J1V7 117 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 TMEM272A0A1B0GTI8 110 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 INMT-MINDY4F8WBC2 141 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 GABARAPH6UMI1 98 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 XRCC3O43542 346 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 SOX15O60248 233 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 CCNKO75909 580 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 RGS11O94810 467 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 BRI3O95415 125 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 IGHV3-11P01762 117 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 TMEM225BP0DP42 221 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 ZNF20P17024 532 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 TAS2R20P59543 309 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 MRPS10P82664 201 aaKnown RBP5.8□□□□□ -1.48
CCDC47-205ENST00000582331 PAX5Q02548 391 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 ECSCRQ19T08 205 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 RNASE12Q5GAN4 147 aaKnown RBP5.8□□□□□ -1.48
CCDC47-205ENST00000582331 GLT8D1Q68CQ7 371 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 LIN54Q6MZP7 749 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 SLC25A48Q6ZT89 311 aaKnown RBP5.8□□□□□ -1.48
CCDC47-205ENST00000582331 WFDC3Q8IUB2 231 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 TOMM5Q8N4H5 51 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 RPP25LQ8N5L8 163 aaKnown RBP5.8□□□□□ -1.48
CCDC47-205ENST00000582331 OR6M1Q8NGM8 313 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 OR13C3Q8NGS6 347 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 PLPPR1Q8TBJ4 325 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 ARL11Q969Q4 196 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 CST11Q9H112 138 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 KCNK15Q9H427 330 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 GFOD1Q9NXC2 390 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 ALG5Q9Y673 324 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 HECTD4Q9Y4D8 3996 aa5.8□□□□□ -1.48
CCDC47-205ENST00000582331 IGHV3-43A0A0B4J1X8 118 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 ANKRD20A5PA0PJZ0 165 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 C7orf66A4D0T2 115 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 CXorf65A6NEN9 183 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 SLC31A2O15432 143 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 CNIH1O95406 144 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 CSTBP04080 98 aaKnown RBP5.79□□□□□ -1.48
CCDC47-205ENST00000582331 TCRBP04435 133 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 IGHV3-43DP0DP04 118 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 PTHLHP12272 177 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 ZP3P21754 424 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 HTR2CP28335 458 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 BDKRB2P30411 391 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 ZNF137PP52743 207 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 ACTBP60709 375 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 QRFPP83859 136 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 TMEM267Q0VDI3 215 aaPredicted RBP5.79□□□□□ -1.48
CCDC47-205ENST00000582331 IL13RA2Q14627 380 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 TATDN3Q17R31 274 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 C5orf64Q2M2E5 130 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 Q3ZCU0 254 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 C19orf54Q5BKX5 351 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 TMEM69Q5SWH9 247 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 ATAD3CQ5T2N8 411 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 ZNF660Q6AZW8 331 aaPredicted RBP5.79□□□□□ -1.48
CCDC47-205ENST00000582331 LCN12Q6JVE5 192 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 TCTEX1D1Q8N7M0 179 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 ZBTB8BQ8NAP8 495 aaPredicted RBP5.79□□□□□ -1.48
CCDC47-205ENST00000582331 UBALD1Q8TB05 177 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 C15orf40Q8WUR7 153 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 RITA1Q96K30 269 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 RHOVQ96L33 236 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 MS4A10Q96PG2 267 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 ZNF251Q9BRH9 671 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 PLEKHA3Q9HB20 300 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 RANGRFQ9HD47 186 aaPredicted RBP5.79□□□□□ -1.48
CCDC47-205ENST00000582331 HRASLSQ9HDD0 168 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 CKLFQ9UBR5 152 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 NUBP2Q9Y5Y2 271 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 KMT2AQ03164 3969 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 KIAA1109Q2LD37 5005 aa5.79□□□□□ -1.48
CCDC47-205ENST00000582331 TRAV18A0A075B6X5 111 aa5.78□□□□□ -1.48
CCDC47-205ENST00000582331 TMEM30CPA0ZSE6 113 aa5.78□□□□□ -1.48
CCDC47-205ENST00000582331 NUPR2A6NF83 97 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms