RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 RNF224P0DH78 156 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 MPLP40238 635 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 EDDM3BP56851 147 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 SLC35E4Q6ICL7 350 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 OR13A1Q8NGR1 328 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 ANAPC16Q96DE5 110 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 CIB3Q96Q77 187 aaPredicted RBP11.44□□□□□ -0.58
RNF43-205ENST00000581868 CDX2Q99626 313 aaPredicted RBP11.44□□□□□ -0.58
RNF43-205ENST00000581868 QTRT1Q9BXR0 403 aaKnown RBP11.44□□□□□ -0.58
RNF43-205ENST00000581868 ARRDC1-AS1Q9H2J1 176 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 TMEM265A0A087WTH1 108 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 IQCF6A8MYZ5 107 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 C17orf112F2Z3M2 114 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 TMPRSS7Q7RTY8 843 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 C11orf53Q8IXP5 236 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 MDS2Q8NDY4 140 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
RNF43-205ENST00000581868 MARCH11A6NNE9 402 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 C21orf140B9A014 251 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 CD46P15529 392 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 ATP5G3P48201 142 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 TGFBR3Q03167 851 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 GABRA6Q16445 453 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 ACOT6Q3I5F7 207 aaPredicted RBP11.43□□□□□ -0.58
RNF43-205ENST00000581868 FAM78BQ5VT40 261 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 SDSLQ96GA7 329 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 WFIKKN1Q96NZ8 548 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 MRPL37Q9BZE1 423 aaKnown RBP11.43□□□□□ -0.58
RNF43-205ENST00000581868 FAM234AQ9H0X4 552 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 HES4Q9HCC6 221 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 WASF3Q9UPY6 502 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 PRR14LQ5THK1 2151 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 PGPEP1LA6NFU8 196 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 TMEM210A6NLX4 147 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 GNB2P62879 340 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 EDDM3AQ14507 147 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 ACP7Q6ZNF0 438 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 TAAR6Q96RI8 345 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 DERL1Q9BUN8 251 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 PATZ1Q9HBE1 687 aaKnown RBP11.43□□□□□ -0.58
RNF43-205ENST00000581868 MSL2Q9HCI7 577 aa11.43□□□□□ -0.58
RNF43-205ENST00000581868 COL27A1Q8IZC6 1860 aaPredicted RBP11.43□□□□□ -0.58
RNF43-205ENST00000581868 C15orf62A8K5M9 175 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 NDUFB4O95168 129 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 IGHV3-13P01766 116 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 IGHV3-7P01780 117 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 OR9G9P0C7N8 305 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 FABP6P51161 128 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 GNB1P62873 340 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 ACTL10Q5JWF8 245 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 ZNF664Q8N3J9 261 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 RNASEH2CQ8TDP1 164 aaKnown RBP11.42□□□□□ -0.58
RNF43-205ENST00000581868 R3HDM4Q96D70 268 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 TMEM204Q9BSN7 226 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 OR6C3Q9NZP0 311 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.42□□□□□ -0.58
RNF43-205ENST00000581868 A0A1W2PPV4 95 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 J3QW42 95 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 GGCTO75223 188 aaKnown RBP11.42□□□□□ -0.58
RNF43-205ENST00000581868 CD1BP29016 333 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 KCNIP4Q6PIL6 250 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 ACY3Q96HD9 319 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 DSPP15924 2871 aaKnown RBP11.42□□□□□ -0.58
RNF43-205ENST00000581868 NCOR1O75376 2440 aa11.42□□□□□ -0.58
RNF43-205ENST00000581868 TIMM8AO60220 97 aaPredicted RBP11.41□□□□□ -0.58
RNF43-205ENST00000581868 FCGR3BO75015 233 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 SRP14P37108 136 aaKnown RBP11.41□□□□□ -0.58
RNF43-205ENST00000581868 VWC2Q2TAL6 325 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 VKORC1L1Q8N0U8 176 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 CNEP1R1Q8N9A8 125 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 A0A0U1RQK1 487 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 ZNF320A2RRD8 509 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 IFNL4K9M1U5 179 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 VENTXO95231 258 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 C1QTNF9P0C862 333 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 CD82P27701 267 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 FOXF2Q12947 444 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 COA6Q5JTJ3 125 aaKnown RBP11.41□□□□□ -0.58
RNF43-205ENST00000581868 WDR82Q6UXN9 313 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 LINC01551Q86U37 167 aa11.41□□□□□ -0.58
RNF43-205ENST00000581868 MRPL41Q8IXM3 137 aaKnown RBP11.41□□□□□ -0.58
RNF43-205ENST00000581868 GMPPAQ96IJ6 420 aaPredicted RBP11.41□□□□□ -0.58
RNF43-205ENST00000581868 HNF1AP20823 631 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 IL3RAP26951 378 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 Q8N7P7 452 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 HSD17B10Q99714 261 aaKnown RBP11.4□□□□□ -0.58
RNF43-205ENST00000581868 CXXC4Q9H2H0 198 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 SNRPCP09234 159 aaKnown RBP11.4□□□□□ -0.58
RNF43-205ENST00000581868 NDUFB7P17568 137 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 USF2Q15853 346 aaPredicted RBP11.4□□□□□ -0.58
RNF43-205ENST00000581868 DBX2Q6ZNG2 339 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 CISD2Q8N5K1 135 aaKnown RBP11.4□□□□□ -0.58
RNF43-205ENST00000581868 ZNF114Q8NC26 417 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 FER1L6-AS2Q96M78 137 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 TRIB1Q96RU8 372 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 PRO3102Q9H379 93 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 WDR83OSQ9Y284 106 aa11.4□□□□□ -0.58
RNF43-205ENST00000581868 A8MWP6 167 aa11.39□□□□□ -0.59
RNF43-205ENST00000581868 SPINT2O43291 252 aa11.39□□□□□ -0.59
RNF43-205ENST00000581868 SOX15O60248 233 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms