RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 H0YIG0 161 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 CCL25O15444 150 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 MLNRO43193 412 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 PDCD6O75340 191 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 SNRNP200O75643 2136 aaKnown RBP6.36□□□□□ -1.39
TVP23C-208ENST00000581273 SCRG1O75711 98 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 MPZL1O95297 269 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 ONECUT2O95948 504 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 IGLV3-1P01715 115 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 SERPINE2P07093 398 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 IGLC2P0DOY2 106 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 IGLC3P0DOY3 106 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 GCH1P30793 250 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 BMI1P35226 326 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 RUNX1Q01196 453 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 VAMP3Q15836 100 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 PRTGQ2VWP7 1150 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 SPIN3Q5JUX0 258 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 ASCL4Q6XD76 172 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 DGAT2L6Q6ZPD8 337 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 C6orf201Q7Z4U5 140 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 CPEB2Q7Z5Q1 589 aaKnown RBP6.36□□□□□ -1.39
TVP23C-208ENST00000581273 TBC1D26Q86UD7 250 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 RBMXL3Q8N7X1 1067 aaKnown RBP6.36□□□□□ -1.39
TVP23C-208ENST00000581273 GJC3Q8NFK1 279 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 VN1R17PQ8TDU5 208 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 SPTSSAQ969W0 71 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 BORCS7Q96B45 105 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 SNRNP40Q96DI7 357 aaKnown RBP6.36□□□□□ -1.39
TVP23C-208ENST00000581273 FOXN4Q96NZ1 517 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 WDR61Q9GZS3 305 aaKnown RBP6.36□□□□□ -1.39
TVP23C-208ENST00000581273 CSTL1Q9H114 145 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF160Q9HCG1 818 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 TUBG2Q9NRH3 451 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 FGF21Q9NSA1 209 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 SOHLH2Q9NX45 425 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 ELOVL5Q9NYP7 299 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 PSENENQ9NZ42 101 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 COPS7AQ9UBW8 275 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 MRPS2Q9Y399 296 aaKnown RBP6.36□□□□□ -1.39
TVP23C-208ENST00000581273 TBL2Q9Y4P3 447 aaKnown RBP6.36□□□□□ -1.39
TVP23C-208ENST00000581273 SCN2AQ99250 2005 aa6.36□□□□□ -1.39
TVP23C-208ENST00000581273 YLPM1P49750 1951 aaKnown RBP6.35□□□□□ -1.39
TVP23C-208ENST00000581273 IGKV1-9A0A0C4DH69 117 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 LOC102725191A0A1B0GVB3 256 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 VSTM2BA6NLU5 285 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 MS4A18H0YCH9 400 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 AQP7O14520 342 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 SYNGR2O43760 224 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 OR2J2O76002 312 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 MT-CO2P00403 227 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 SCGB1A1P11684 91 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 MDKP21741 143 aaPredicted RBP6.35□□□□□ -1.39
TVP23C-208ENST00000581273 OTX2P32243 289 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 ASCL1P50553 236 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 BIDP55957 195 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 CLDN15P56746 228 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 GNB2P62879 340 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 RHOGP84095 191 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 POU3F1Q03052 451 aaPredicted RBP6.35□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF90Q03938 601 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 PLCXD2Q0VAA5 305 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 NNATQ16517 81 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 HLA-DRB5Q30154 266 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 MS4A18Q3C1V0 323 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 LRRC10Q5BKY1 277 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 STUMQ69YW2 141 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 PRR27Q6MZM9 219 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 VWA1Q6PCB0 445 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 Q6ZWC4 215 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 Q71RC1 249 aaPredicted RBP6.35□□□□□ -1.39
TVP23C-208ENST00000581273 MYPOPQ86VE0 399 aaPredicted RBP6.35□□□□□ -1.39
TVP23C-208ENST00000581273 WDFY1Q8IWB7 410 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF525Q8N782 197 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 OR10G8Q8NGN5 311 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 TAF15Q92804 592 aaKnown RBP eCLIP6.35□□□□□ -1.39
TVP23C-208ENST00000581273 NUDT11Q96G61 164 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 REEP6Q96HR9 211 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 SIGLEC12Q96PQ1 595 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 SPACA5Q96QH8 159 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 RASL10BQ96S79 203 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 ADOQ96SZ5 270 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 TMEM147Q9BVK8 224 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 GNB1LQ9BYB4 327 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF319Q9P2F9 582 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 RNF115Q9Y4L5 304 aa6.35□□□□□ -1.39
TVP23C-208ENST00000581273 RBM7Q9Y580 266 aaKnown RBP6.35□□□□□ -1.39
TVP23C-208ENST00000581273 PRRC2AP48634 2157 aaKnown RBP6.34□□□□□ -1.39
TVP23C-208ENST00000581273 IGKV1D-8A0A087WSZ0 117 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 IGHV2-26A0A0B4J1V2 119 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 A0A1W2PP11 408 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 SLC33A1O00400 549 aaPredicted RBP6.34□□□□□ -1.39
TVP23C-208ENST00000581273 RAMP3O60896 148 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 HYPMO75409 117 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 CEACAM4O75871 244 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 S1PR2O95136 353 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 CTRLP40313 264 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 PRRX1P54821 245 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms