RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 VDAC2P45880 294 aaPredicted RBP2.87□□□□□ -1.95
NF1-220ENST00000581113 CCR6P51684 374 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 DEFA1P59665 94 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 NAA20P61599 178 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 REG3AQ06141 175 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 BAXQ07812 192 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 DAZ2Q13117 558 aaKnown RBP2.87□□□□□ -1.95
NF1-220ENST00000581113 CDK10Q15131 360 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 TSNQ15631 228 aaKnown RBP2.87□□□□□ -1.95
NF1-220ENST00000581113 TRMT12Q53H54 448 aaKnown RBP2.87□□□□□ -1.95
NF1-220ENST00000581113 SYT6Q5T7P8 510 aaPredicted RBP2.87□□□□□ -1.95
NF1-220ENST00000581113 NAA40Q86UY6 237 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 CALHM3Q86XJ0 350 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 C20orf203Q8NBC4 194 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 OR1N2Q8NGR9 330 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 OR51Q1Q8NH59 317 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 NEIL3Q8TAT5 605 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 ABHD3Q8WU67 409 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 IL22RA2Q969J5 263 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 CMSS1Q9BQ75 279 aaKnown RBP2.87□□□□□ -1.95
NF1-220ENST00000581113 C1orf50Q9BV19 199 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 SLIRPQ9GZT3 109 aaKnown RBP2.87□□□□□ -1.95
NF1-220ENST00000581113 OR51E2Q9H255 320 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 DAZ3Q9NR90 486 aaKnown RBP2.87□□□□□ -1.95
NF1-220ENST00000581113 RBM22Q9NW64 420 aaKnown RBP eCLIP2.87□□□□□ -1.95
NF1-220ENST00000581113 COMMD9Q9P000 198 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 RAB22AQ9UL26 194 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 ORC6Q9Y5N6 252 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 DOCK4Q8N1I0 1966 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 FASNP49327 2511 aaKnown RBP2.87□□□□□ -1.95
NF1-220ENST00000581113 IGSF10Q6WRI0 2623 aa2.87□□□□□ -1.95
NF1-220ENST00000581113 BAHCC1Q9P281 2608 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 TRPM6Q9BX84 2022 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 PPP5D1E7EU14 171 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 LINC01619G3V211 115 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 RTL8CO15255 209 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 SPAG7O75391 227 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 SUPT3HO75486 399 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 APOC1P02654 83 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 GABRA4P48169 554 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 MAXP61244 160 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 SLC35A2P78381 396 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 EIF3IQ13347 325 aaKnown RBP2.86□□□□□ -1.95
NF1-220ENST00000581113 SURF2Q15527 256 aaPredicted RBP2.86□□□□□ -1.95
NF1-220ENST00000581113 HIST3H3Q16695 136 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 KLF17Q5JT82 389 aaPredicted RBP2.86□□□□□ -1.95
NF1-220ENST00000581113 CLEC12AQ5QGZ9 265 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 ZNF684Q5T5D7 378 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 SPATA31B1PQ5VZV4 182 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 NCBP2-AS2Q69YL0 99 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 KDM4DQ6B0I6 523 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 TNFAIP8L2Q6P589 184 aaPredicted RBP2.86□□□□□ -1.95
NF1-220ENST00000581113 ZNF620Q6ZNG0 422 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 OR4M1Q8NGD0 313 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 OR8J3Q8NGG0 315 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 OR9I1Q8NGQ6 314 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 OR4X1Q8NH49 305 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 CCL4L1Q8NHW4 92 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 C11orf40Q8WZ69 217 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 TMEM159Q96B96 161 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 SMIM12Q96EX1 92 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 FAM19A4Q96LR4 140 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 PPP1R2P1Q96PQ5 205 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 QKIQ96PU8 341 aaKnown RBP eCLIP2.86□□□□□ -1.95
NF1-220ENST00000581113 RTBDNQ9BSG5 229 aaPredicted RBP2.86□□□□□ -1.95
NF1-220ENST00000581113 KIFC1Q9BW19 673 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 POLR2J2Q9GZM3 115 aaKnown RBP2.86□□□□□ -1.95
NF1-220ENST00000581113 CCDC90BQ9GZT6 254 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 POLR2J3Q9H1A7 115 aaKnown RBP2.86□□□□□ -1.95
NF1-220ENST00000581113 ZNF331Q9NQX6 463 aaPredicted RBP2.86□□□□□ -1.95
NF1-220ENST00000581113 BIN3Q9NQY0 253 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 IDI2-AS1Q9NZ38 188 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 OR52A1Q9UKL2 312 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 SIGLEC9Q9Y336 463 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 NUBP2Q9Y5Y2 271 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 LOC400499M0QZD8 3231 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 NBEAQ8NFP9 2946 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 PTPRQQ9UMZ3 2332 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 DOCK9Q9BZ29 2069 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 CHD5Q8TDI0 1954 aa2.86□□□□□ -1.95
NF1-220ENST00000581113 A0A087X0T9 212 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 A6NDN8 102 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 H3BP45 60 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 KPNA4O00629 521 aaPredicted RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 MFSD11O43934 449 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 ATG12O94817 140 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 PROSCO94903 275 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 SOD1P00441 154 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 MOSP00540 346 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 GYPCP04921 128 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 SLC35G6P0C7Q6 338 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 PSG2P11465 335 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 SPNP16150 400 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 ZNF30P17039 623 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 AK4P27144 223 aaPredicted RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 CTRLP40313 264 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 GZMMP51124 257 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 MTPNP58546 118 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 RPL26P61254 145 aaKnown RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 IHHQ14623 411 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms