RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 ACP7Q6ZNF0 438 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 RPP25LQ8N5L8 163 aaKnown RBP8.77□□□□□ -1.01
TOP3A-209ENST00000580095 TUBA4BQ9H853 241 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 A0A1B0GW64 132 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 TSTD3H0UI37 97 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 MKRN2OSH3BPM6 223 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 CYB5BO43169 146 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 HSPB1P04792 205 aaKnown RBP8.76□□□□□ -1.01
TOP3A-209ENST00000580095 FTH1P19P0C7X4 201 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 EGR1P18146 543 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 ZNF83P51522 516 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 HBG1P69891 147 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 HBG2P69892 147 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 TFF3Q07654 80 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 ELOBQ15370 118 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 LRRC75BQ2VPJ9 315 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 CD177Q8N6Q3 437 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 ZNF645Q8N7E2 425 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 LRRC29Q8WV35 223 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 TVP23CQ96ET8 276 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 YPEL4Q96NS1 127 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 TAAR6Q96RI8 345 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 WDR61Q9GZS3 305 aaKnown RBP8.76□□□□□ -1.01
TOP3A-209ENST00000580095 SH3BGRL2Q9UJC5 107 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 MAP1LC3B2A6NCE7 125 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 BCL2P10415 239 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 NDUFA6P56556 154 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 FAM90A2PQ658T7 463 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 ACSM6Q6P461 480 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 INO80CQ6PI98 192 aaPredicted RBP8.76□□□□□ -1.01
TOP3A-209ENST00000580095 ZNRF1Q8ND25 227 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 TAF15Q92804 592 aaKnown RBP eCLIP8.76□□□□□ -1.01
TOP3A-209ENST00000580095 MAP1LC3BQ9GZQ8 125 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 PARD6AQ9NPB6 346 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 RYDENQ9NUL5 291 aaKnown RBP8.76□□□□□ -1.01
TOP3A-209ENST00000580095 TACC2O95359 2948 aa8.76□□□□□ -1.01
TOP3A-209ENST00000580095 CIDEAO60543 219 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 IGKV3-15P01624 115 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 GFI1BQ5VTD9 330 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 NECAP1Q8NC96 275 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 LHX4Q969G2 390 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 LOXL4Q96JB6 756 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 POLEQ07864 2286 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 IGHV1-18A0A0C4DH31 117 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 HBE1P02100 147 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 SLC25A6P12236 298 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 GCSAMLQ5JQS6 135 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 NCR3LG1Q68D85 454 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 RPUSD4Q96CM3 377 aaKnown RBP8.75□□□□□ -1.01
TOP3A-209ENST00000580095 CXXC4Q9H2H0 198 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 HES4Q9HCC6 221 aa8.75□□□□□ -1.01
TOP3A-209ENST00000580095 IGHV2OR16-5A0A0B4J2B6 119 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 LRRC30A6NM36 301 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 TRGC2P03986 189 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 HOXA5P20719 270 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 GCH1P30793 250 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 KHDC3LQ587J8 217 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 OR5T1Q8NG75 326 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 SLC39A9Q9NUM3 307 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 TPRP12270 2363 aaKnown RBP8.74□□□□□ -1.01
TOP3A-209ENST00000580095 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.74□□□□□ -1.01
TOP3A-209ENST00000580095 OOEPA6NGQ2 149 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 EDDM3BP56851 147 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 GAGE1Q13065 139 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 RPL39P5Q59GN2 51 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 DUX4L9Q6RFH8 374 aaPredicted RBP8.74□□□□□ -1.01
TOP3A-209ENST00000580095 H2BFWTQ7Z2G1 175 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 NDUFAF3Q9BU61 184 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 AURKAIP1Q9NWT8 199 aaPredicted RBP8.74□□□□□ -1.01
TOP3A-209ENST00000580095 GNG12Q9UBI6 72 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 DKK4Q9UBT3 224 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 A8MWP6 167 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 FCGR3BO75015 233 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 PROP1O75360 226 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 ZNF737O75373 536 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 IGHG3P01860 377 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 FGF7P21781 194 aa8.74□□□□□ -1.01
TOP3A-209ENST00000580095 WDR25Q64LD2 544 aaPredicted RBP8.74□□□□□ -1.01
TOP3A-209ENST00000580095 QTRT1Q9BXR0 403 aaKnown RBP8.74□□□□□ -1.01
TOP3A-209ENST00000580095 APC2O95996 2303 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 SPRY3O43610 288 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 TNFSF13O75888 250 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 IFNA17P01571 189 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 PRDX2P32119 198 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 RTP5Q14D33 572 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 GUSBP1Q15486 140 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 ZNF718Q3SXZ3 478 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 ACSF3Q4G176 576 aaPredicted RBP8.73□□□□□ -1.01
TOP3A-209ENST00000580095 TMEM41BQ5BJD5 291 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 C1orf185Q5T7R7 199 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 DMRTA1Q5VZB9 504 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 TMEM14EPQ6UXP3 125 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 DEFB108BQ8NET1 73 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 RAB24Q969Q5 203 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 STARD4Q96DR4 205 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 HSPB7Q9UBY9 170 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 NBASA2RRP1 2371 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 IGKV1D-17A0A075B6S4 117 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 RNF212BA8MTL3 300 aa8.73□□□□□ -1.01
TOP3A-209ENST00000580095 M0R1B8 84 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms