RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 SCGB3A2Q96PL1 93 aa12.4□□□□□ -0.42
SLC6A4-205ENST00000579221 TSNAXQ99598 290 aaKnown RBP12.4□□□□□ -0.42
SLC6A4-205ENST00000579221 CCDC32Q9BV29 185 aa12.4□□□□□ -0.42
SLC6A4-205ENST00000579221 BEX1Q9HBH7 125 aa12.4□□□□□ -0.42
SLC6A4-205ENST00000579221 SLC2A8Q9NY64 477 aa12.4□□□□□ -0.42
SLC6A4-205ENST00000579221 KIAA1456Q9P272 454 aa12.4□□□□□ -0.42
SLC6A4-205ENST00000579221 NF1P21359 2839 aa12.4□□□□□ -0.42
SLC6A4-205ENST00000579221 A0A1B0GUS0 222 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 CENPXA8MT69 81 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 NBR2O15453 112 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 IGKV1-16P04430 117 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 IL7P13232 177 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 CD40LGP29965 261 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 SURF2Q15527 256 aaPredicted RBP12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 ABCA11PQ4W5N1 156 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 PHLDA2Q53GA4 152 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 TMEM177Q53S58 311 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 IDO2Q6ZQW0 420 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 POC5Q8NA72 575 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 MARCH1Q8TCQ1 289 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 CD300LFQ8TDQ1 290 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 TAF15Q92804 592 aaKnown RBP eCLIP12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 GPHA2Q96T91 129 aa12.39□□□□□ -0.43
SLC6A4-205ENST00000579221 NAP1L6A6NFF2 107 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 SHOXO15266 292 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 PEX14O75381 377 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 CRYZL1O95825 349 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 AMY1AP04745 511 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 CNTFRP26992 372 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 ARSJQ5FYB0 599 aaPredicted RBP12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 OR2B11Q5JQS5 317 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 C9orf152Q5JTZ5 239 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 Q8N2B8 174 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 OR51H1Q8NH63 302 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 OR4S2Q8NH73 311 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 OR2T6Q8NHC8 308 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 OSR1Q8TAX0 266 aaPredicted RBP12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 ZNF702PQ9H963 129 aa12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 LIN7CQ9NUP9 197 aaKnown RBP12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 C14orf166Q9Y224 244 aaKnown RBP12.38□□□□□ -0.43
SLC6A4-205ENST00000579221 CLPSL1A2RUU4 121 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 RRHO14718 337 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 NDUFA3O95167 84 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 CTSDP07339 412 aaPredicted RBP12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 RND3P61587 244 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 PSG5Q15238 335 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 LIN54Q6MZP7 749 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 SPAG16Q8N0X2 631 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 TCTEX1D1Q8N7M0 179 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 CCDC71LQ8N9Z2 235 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 OR13C8Q8NGS7 320 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 LINC01006Q8NI28 216 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 HARBI1Q96MB7 349 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 C7orf50Q9BRJ6 194 aaKnown RBP12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 AIFM2Q9BRQ8 373 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 GPR132Q9UNW8 380 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 MMP24Q9Y5R2 645 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 CUBNO60494 3623 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 JMJD1CQ15652 2540 aa12.37□□□□□ -0.43
SLC6A4-205ENST00000579221 ZFHX3Q15911 3703 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 LINC00854A0A1B0GVQ3 168 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 SH2D7A6NKC9 451 aaPredicted RBP12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 MPPED1O15442 326 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 RBFOX2O43251 390 aaKnown RBP eCLIP12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 SPDEFO95238 335 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 RLN1P04808 185 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 F2RP25116 425 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 PIGPP57054 158 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 BRWD1-AS2P59051 145 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 PLGLAQ15195 96 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 VMA21Q3ZAQ7 101 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 FAM71E2Q8N5Q1 922 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 MRGPRFQ96AM1 343 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 MDFIQ99750 246 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 SLC2A9Q9NRM0 540 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 COPZ2Q9P299 210 aa12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 METTL1Q9UBP6 276 aaKnown RBP12.36□□□□□ -0.43
SLC6A4-205ENST00000579221 SRRM4A7MD48 611 aaKnown RBP12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 HPRT1P00492 218 aa12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 HRASP01112 189 aa12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 PI3P19957 117 aa12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 MDKP21741 143 aaPredicted RBP12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 COMPP49747 757 aaPredicted RBP12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 AWAT1Q58HT5 328 aa12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 Q6ZS46 218 aa12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 TEX45Q8NA69 505 aa12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 SLC25A21Q9BQT8 299 aaPredicted RBP12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 RTBDNQ9BSG5 229 aaPredicted RBP12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 FBXL15Q9H469 300 aa12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 FAM212BQ9NTI7 297 aaPredicted RBP12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 SIGLEC9Q9Y336 463 aa12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 RNF114Q9Y508 228 aa12.35□□□□□ -0.43
SLC6A4-205ENST00000579221 SLC25A17O43808 307 aa12.34□□□□□ -0.43
SLC6A4-205ENST00000579221 IGLV2-23P01705 113 aa12.34□□□□□ -0.43
SLC6A4-205ENST00000579221 IGHG2P01859 326 aa12.34□□□□□ -0.43
SLC6A4-205ENST00000579221 VDAC2P45880 294 aaPredicted RBP12.34□□□□□ -0.43
SLC6A4-205ENST00000579221 UBE2KP61086 200 aa12.34□□□□□ -0.43
SLC6A4-205ENST00000579221 C12orf54Q6X4T0 127 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms