RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 ZNF383Q8NA42 475 aa9.06□□□□□ -0.96
CDK5RAP3-210ENST00000578733 DRAXINQ8NBI3 349 aaPredicted RBP9.06□□□□□ -0.96
CDK5RAP3-210ENST00000578733 OR51H1Q8NH63 302 aa9.06□□□□□ -0.96
CDK5RAP3-210ENST00000578733 OSR1Q8TAX0 266 aaPredicted RBP9.06□□□□□ -0.96
CDK5RAP3-210ENST00000578733 TSNAXQ99598 290 aaKnown RBP9.06□□□□□ -0.96
CDK5RAP3-210ENST00000578733 FAM212BQ9NTI7 297 aaPredicted RBP9.06□□□□□ -0.96
CDK5RAP3-210ENST00000578733 DNAJC9-AS1A6NH13 148 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 FAM90A9PA6NNJ1 464 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 LINC00473A8K010 186 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 MPPED1O15442 326 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 RBFOX2O43251 390 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 PROP1O75360 226 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 OR2F2O95006 317 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 SPDEFO95238 335 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 RPA2P15927 270 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 F2RP25116 425 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 PAX6P26367 422 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 LGALS7P47929 136 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 CCR6P51684 374 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 UBE2MP61081 183 aaKnown RBP9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 RPL15P61313 204 aaKnown RBP9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 RPS16P62249 146 aaKnown RBP9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 EBI3Q14213 229 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 LY6EQ16553 131 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 C5orf30Q96GV9 206 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 EAF1Q96JC9 268 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 C5orf66Q9H5L9 145 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 TNFRSF19Q9NS68 423 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 TBC1D24Q9ULP9 559 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 MOB4Q9Y3A3 225 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 NUBP2Q9Y5Y2 271 aa9.05□□□□□ -0.96
CDK5RAP3-210ENST00000578733 C3orf85A0A1B0GTC6 90 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 A6NDX4 124 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 H0Y980 276 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 SHOXO15266 292 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 CREBL2O60519 120 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 CRYZL1O95825 349 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 PTTG1O95997 202 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 HPRT1P00492 218 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 HRASP01112 189 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 TCRBP04435 133 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 CRYBA1P05813 215 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 SERPINE2P07093 398 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 RNASE1P07998 156 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 AKR1C4P17516 323 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 PI3P19957 117 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 CD24P25063 80 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 SLC6A1P30531 599 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 BTCP35070 178 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 ERVK-16P61578 105 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 SRPXP78539 464 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 DHODHQ02127 395 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 EIF4EBP1Q13541 118 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 HNF4GQ14541 408 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 PLGLAQ15195 96 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 MMDQ15546 238 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 SLC9A3R2Q15599 337 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 VMA21Q3ZAQ7 101 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 TMEM177Q53S58 311 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 TMEM128Q5BJH2 165 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 OR2B11Q5JQS5 317 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 DUSP18Q8NEJ0 188 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 VSTM2AQ8TAG5 236 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 ZFAND2BQ8WV99 257 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 DDB2Q92466 427 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 MRGPRFQ96AM1 343 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 HARBI1Q96MB7 349 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 RBM14Q96PK6 669 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 RTBDNQ9BSG5 229 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 SLC25A33Q9BSK2 321 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 C20orf85Q9H1P6 137 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 NAA60Q9H7X0 242 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 VSIG4Q9Y279 399 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 CUBNO60494 3623 aa9.04□□□□□ -0.96
CDK5RAP3-210ENST00000578733 CRYM-AS1A6NIL9 109 aa9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 NCBP2LA6PVI3 153 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 ARPC1BO15143 372 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 NBR2O15453 112 aa9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 FGF16O43320 207 aa9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 NQO2P16083 231 aa9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 RPL30P62888 115 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 UBA52P62987 128 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 TRIM16LQ309B1 348 aa9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 PLET1Q6UQ28 207 aa9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 RASL11BQ9BPW5 248 aa9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 NPFFR1Q9GZQ6 430 aa9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 PLEKHA2Q9HB19 425 aa9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 COMMD9Q9P000 198 aa9.03□□□□□ -0.96
CDK5RAP3-210ENST00000578733 GPR137BO60478 399 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 H2AFB2P0C5Z0 115 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 VAMP1P23763 118 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 RAB25P57735 213 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 RGS21Q2M5E4 152 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 C4orf46Q504U0 113 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 NRARPQ7Z6K4 114 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 SLC25A42Q86VD7 318 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 TMEM219Q86XT9 240 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 PIFOQ8TCI5 191 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 GPHA2Q96T91 129 aa9.02□□□□□ -0.97
CDK5RAP3-210ENST00000578733 CHIAQ9BZP6 476 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms