RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 PKIGQ9Y2B9 76 aa2.53□□□□□ -2
TRAPPC8-205ENST00000578658 ZNF257Q9Y2Q1 563 aa2.53□□□□□ -2
TRAPPC8-205ENST00000578658 YTHDF2Q9Y5A9 579 aaKnown RBP2.53□□□□□ -2
TRAPPC8-205ENST00000578658 UBIAD1Q9Y5Z9 338 aa2.53□□□□□ -2
TRAPPC8-205ENST00000578658 TMEM131LA2VDJ0 1609 aa2.53□□□□□ -2
TRAPPC8-205ENST00000578658 CCDC88BA6NC98 1476 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 TCOF1Q13428 1488 aaKnown RBP2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 TEX14Q8IWB6 1497 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 SCAF11Q99590 1463 aaKnown RBP2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 NPHP4O75161 1426 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 NSD3Q9BZ95 1437 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 TRAPPC8Q9Y2L5 1435 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 LOC100130705A0A1B0GUX0 176 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 AIPO00170 330 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 NPIPB7O75200 414 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 SCRG1O75711 98 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 NDUFC2O95298 119 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 MPC2O95563 127 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 OR2H2O95918 312 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 IGKV1D-16P01601 117 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 IGHMP01871 453 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 SERPINE1P05121 402 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 CSN2P05814 226 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 PGA5P0DJD9 388 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 RCC1P18754 421 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 ATF1P18846 271 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 CXCL2P19875 107 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 CXCL3P19876 107 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 PSMB9P28065 219 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 PFN2P35080 140 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 TGFBR1P36897 503 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 GPR6P46095 362 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 LIM2P55344 173 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 KRTAP10-1P60331 282 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 SLC35A1P78382 337 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 LOXL1Q08397 574 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 EGFEM1PQ0D2K5 195 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 ENDOGQ14249 297 aaKnown RBP2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 BATFQ16520 125 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 TMEM255AQ5JRV8 349 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 KDM4DQ6B0I6 523 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 OR2T5Q6IEZ7 315 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 RPL22L1Q6P5R6 122 aaKnown RBP2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 SLC35E3Q7Z769 313 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 MRPL55Q7Z7F7 128 aaKnown RBP2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 C20orf196Q8IYI0 205 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 SLC25A45Q8N413 288 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 PLPP5Q8NEB5 264 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 NUP35Q8NFH5 326 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 OR4S1Q8NGB4 309 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 OR4K5Q8NGD3 323 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 OR2T29Q8NH02 315 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 OR10G6Q8NH81 332 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 JOSD2Q8TAC2 188 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 PP6455Q8WZ26 134 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 TMEM54Q969K7 222 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 TMEM106AQ96A25 262 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 GALNT14Q96FL9 552 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 SEC22AQ96IW7 307 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 SLC35E1Q96K37 410 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 FAM19A4Q96LR4 140 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 LINC00052Q96N35 136 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 IP6K3Q96PC2 410 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 DERL3Q96Q80 235 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 TSPAN32Q96QS1 320 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 PITX2Q99697 317 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 ZNF471Q9BX82 626 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 OR8D2Q9GZM6 311 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 OR2D2Q9H210 308 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 SRMSQ9H3Y6 488 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 SAR1AQ9NR31 198 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 FAM49BQ9NUQ9 324 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 MYH7P12883 1935 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 MYH2Q9UKX2 1941 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 ARHGEF11O15085 1522 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 FANCD2Q9BXW9 1451 aa2.52□□□□□ -2.01
TRAPPC8-205ENST00000578658 DAPK1P53355 1430 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 ADAMTSL3P82987 1691 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 NFASCO94856 1347 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 PLXND1Q9Y4D7 1925 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 TMEM269A0A1B0GVZ9 245 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 A0A1B0GW64 132 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 LINC01619G3V211 115 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 TRAF3IP2O43734 574 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 EPPINO95925 133 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 PAEPP09466 180 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 HLA-EP13747 358 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 AGTR1P30556 359 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 RBMXP38159 391 aaKnown RBP2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 PPICP45877 212 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 CTBP2P56545 445 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 NDUFA6P56556 154 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 H2BFSP57053 126 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 MEF2BQ02080 365 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 PRDX1Q06830 199 aaKnown RBP2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 HSD52Q0P140 79 aa2.51□□□□□ -2.01
TRAPPC8-205ENST00000578658 LAMTOR4Q0VGL1 99 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms