RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 CMTM3Q96MX0 182 aa15.3■□□□□ 0.04
SS18-209ENST00000578595 FAM103A1Q9BTL3 118 aaKnown RBP15.3■□□□□ 0.04
SS18-209ENST00000578595 SLC5A7Q9GZV3 580 aa15.3■□□□□ 0.04
SS18-209ENST00000578595 A0A1W2PN81 502 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 FCN1O00602 326 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 TNFSF12O43508 249 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 PMP2P02689 132 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 ELANEP08246 267 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 CHRNA7P36544 502 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 LGALS7P47929 136 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 TAS2R46P59540 309 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 DEFA6Q01524 100 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 VMA21Q3ZAQ7 101 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 ZNF660Q6AZW8 331 aaPredicted RBP15.29■□□□□ 0.04
SS18-209ENST00000578595 ZNF695Q8IW36 515 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 CCL28Q9NRJ3 127 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 ZFP57Q9NU63 452 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 EXTL2Q9UBQ6 330 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 SCOCQ9UIL1 159 aa15.29■□□□□ 0.04
SS18-209ENST00000578595 CMYA5Q8N3K9 4069 aa15.28■□□□□ 0.04
SS18-209ENST00000578595 CCDC160A6NGH7 325 aa15.28■□□□□ 0.04
SS18-209ENST00000578595 HLA-DMAP28067 261 aa15.28■□□□□ 0.04
SS18-209ENST00000578595 RAB25P57735 213 aa15.28■□□□□ 0.04
SS18-209ENST00000578595 UNQ5815/PRO19632Q6UWF5 114 aa15.28■□□□□ 0.04
SS18-209ENST00000578595 ARPC1AQ92747 370 aa15.28■□□□□ 0.04
SS18-209ENST00000578595 HSD17B10Q99714 261 aaKnown RBP15.28■□□□□ 0.04
SS18-209ENST00000578595 FBXO7Q9Y3I1 522 aa15.28■□□□□ 0.04
SS18-209ENST00000578595 IGHG4P01861 327 aa15.27■□□□□ 0.04
SS18-209ENST00000578595 RFX2P48378 723 aa15.27■□□□□ 0.04
SS18-209ENST00000578595 TMEM267Q0VDI3 215 aaPredicted RBP15.27■□□□□ 0.04
SS18-209ENST00000578595 FXYD3Q14802 87 aa15.27■□□□□ 0.04
SS18-209ENST00000578595 TMEM177Q53S58 311 aa15.27■□□□□ 0.04
SS18-209ENST00000578595 PPP1R27Q86WC6 154 aa15.27■□□□□ 0.04
SS18-209ENST00000578595 GPHA2Q96T91 129 aa15.27■□□□□ 0.04
SS18-209ENST00000578595 SCPEP1Q9HB40 452 aa15.27■□□□□ 0.04
SS18-209ENST00000578595 ADAM30Q9UKF2 790 aa15.27■□□□□ 0.04
SS18-209ENST00000578595 G3V4G9 280 aa15.26■□□□□ 0.03
SS18-209ENST00000578595 TMBIM6P55061 237 aa15.26■□□□□ 0.03
SS18-209ENST00000578595 RPL30P62888 115 aaKnown RBP15.26■□□□□ 0.03
SS18-209ENST00000578595 CFHR3Q02985 330 aa15.26■□□□□ 0.03
SS18-209ENST00000578595 IDO2Q6ZQW0 420 aa15.26■□□□□ 0.03
SS18-209ENST00000578595 DDB2Q92466 427 aa15.26■□□□□ 0.03
SS18-209ENST00000578595 DUX3Q96PT4 197 aa15.26■□□□□ 0.03
SS18-209ENST00000578595 PHB2Q99623 299 aa15.26■□□□□ 0.03
SS18-209ENST00000578595 ZNF2Q9BSG1 426 aaPredicted RBP15.26■□□□□ 0.03
SS18-209ENST00000578595 ZNF580Q9UK33 172 aa15.26■□□□□ 0.03
SS18-209ENST00000578595 IGLV2-23P01705 113 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 HRH1P35367 487 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 TSPAN5P62079 268 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 PJVKQ0ZLH3 352 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 CATR1Q13166 79 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 DEFB136Q30KP8 78 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 ACTBL2Q562R1 376 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 ZNF562Q6V9R5 426 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 MFSD4AQ8N468 514 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 LFNGQ8NES3 379 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 OR4S2Q8NH73 311 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 OSR1Q8TAX0 266 aaPredicted RBP15.25■□□□□ 0.03
SS18-209ENST00000578595 GPX8Q8TED1 209 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 CASTOR1Q8WTX7 329 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 BCL7BQ9BQE9 202 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 ZNF355PQ9NSJ1 428 aa15.25■□□□□ 0.03
SS18-209ENST00000578595 FOXA2Q9Y261 457 aaPredicted RBP15.25■□□□□ 0.03
SS18-209ENST00000578595 MEGF8Q7Z7M0 2845 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 ACTL6BO94805 426 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 IGLV2-14P01704 120 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 PSMB8P28062 276 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 CD40LGP29965 261 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 RCVRNP35243 200 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 DYRK1AQ13627 763 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 TNXAQ16473 311 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 ZNF66Q6ZN08 573 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 GIMAP1Q8WWP7 306 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 OR5B12Q96R08 314 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 C6orf62Q9GZU0 229 aaPredicted RBP15.24■□□□□ 0.03
SS18-209ENST00000578595 ANAPC10Q9UM13 185 aa15.24■□□□□ 0.03
SS18-209ENST00000578595 SRRM4A7MD48 611 aaKnown RBP15.23■□□□□ 0.03
SS18-209ENST00000578595 SAA1P0DJI8 122 aaPredicted RBP15.23■□□□□ 0.03
SS18-209ENST00000578595 IGLL1P15814 213 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 PPIFP30405 207 aaKnown RBP15.23■□□□□ 0.03
SS18-209ENST00000578595 SLC6A1P30531 599 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 UBE2KP61086 200 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 OXLD1Q5BKU9 147 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 AADACL3Q5VUY0 350 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 OVCH2Q7RTZ1 564 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 LAX1Q8IWV1 398 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 TCTEX1D1Q8N7M0 179 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 OR6F1Q8NGZ6 308 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 OR51H1Q8NH63 302 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 BORCS5Q969J3 196 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 ISOC1Q96CN7 298 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 KLK15Q9H2R5 256 aa15.23■□□□□ 0.03
SS18-209ENST00000578595 CCDC59Q9P031 241 aaKnown RBP15.23■□□□□ 0.03
SS18-209ENST00000578595 H3BMQ9 156 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 SULT1C2O00338 296 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 ARPC1BO15143 372 aaKnown RBP15.22■□□□□ 0.03
SS18-209ENST00000578595 MPPED1O15442 326 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 CREBL2O60519 120 aaPredicted RBP15.22■□□□□ 0.03
SS18-209ENST00000578595 APELAP0DMC3 54 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 NAT1P18440 290 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms