RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 TMEM178AQ8NBL3 297 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 RND1Q92730 232 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 TAF15Q92804 592 aaKnown RBP eCLIP11.5□□□□□ -0.57
NDEL1-204ENST00000578172 MUCL1Q96DR8 90 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 TECTBQ96PL2 329 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 ADGRG4Q8IZF6 3080 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 FAM157AC9JC47 383 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST1H2BKO60814 126 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST1H2BJP06899 126 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HOXA5P20719 270 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 IGHV1-2P23083 117 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST1H2BOP23527 126 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST1H2BBP33778 126 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST1H2BDP58876 126 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST1H2BCP62807 126 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST2H2BEQ16778 126 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.5□□□□□ -0.57
NDEL1-204ENST00000578172 LURAP1LQ8IV03 231 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 H1FOOQ8IZA3 346 aaPredicted RBP11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST1H2BHQ93079 126 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST1H2BNQ99877 126 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 HIST1H2BMQ99879 126 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 DDA1Q9BW61 102 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 A0A1B0GU03 582 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 SOD3P08294 240 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 CD33P20138 364 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 PMCHP20382 165 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 ZNF525Q8N782 197 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 TRAPPC1Q9Y5R8 145 aa11.5□□□□□ -0.57
NDEL1-204ENST00000578172 REG1BP48304 166 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 ZNF90Q03938 601 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 DAZAP2Q15038 168 aaPredicted RBP11.49□□□□□ -0.57
NDEL1-204ENST00000578172 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 DPPA3Q6W0C5 159 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 MOGAT3Q86VF5 341 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 RAB24Q969Q5 203 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 GUCD1Q96NT3 240 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 RIMS4Q9H426 269 aaPredicted RBP11.49□□□□□ -0.57
NDEL1-204ENST00000578172 EXPH5Q8NEV8 1989 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 A0A1B0GUS0 222 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 TMEM241Q24JQ0 296 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 ACSM6Q6P461 480 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 HEPN1Q6WQI6 88 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 LRTM2Q8N967 370 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 SPINT2O43291 252 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 SMPD2O60906 423 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 ERVK-16P61578 105 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 LYG1Q8N1E2 194 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 FKBP11Q9NYL4 201 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 ZNRD1Q9P1U0 126 aa11.49□□□□□ -0.57
NDEL1-204ENST00000578172 TANC2Q9HCD6 1990 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 IGKV1D-33P01593 117 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 IGKV1-33P01594 117 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 AGAP20933 346 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 ZNF726P1Q15940 193 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 ZNF585BQ52M93 769 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 RPP25LQ8N5L8 163 aaKnown RBP11.48□□□□□ -0.57
NDEL1-204ENST00000578172 VN1R17PQ8TDU5 208 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 PLEKHA3Q9HB20 300 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.48□□□□□ -0.57
NDEL1-204ENST00000578172 IL36GQ9NZH8 169 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 PITPNC1Q9UKF7 332 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 RNF24Q9Y225 148 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 GOLT1BQ9Y3E0 138 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 TNRC18O15417 2968 aaPredicted RBP11.48□□□□□ -0.57
NDEL1-204ENST00000578172 KITLGP21583 273 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 TNFRSF9Q07011 255 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 HAPLN4Q86UW8 402 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 TBX15Q96SF7 602 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 QTRT1Q9BXR0 403 aaKnown RBP11.48□□□□□ -0.57
NDEL1-204ENST00000578172 TUBA4BQ9H853 241 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 TP53TG5Q9Y2B4 290 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 ELOA3CA0A087WX78 387 aaPredicted RBP11.48□□□□□ -0.57
NDEL1-204ENST00000578172 LOC102723971A0A1B0GUV8 181 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 NDUFB4O95168 129 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 TCL1AP56279 114 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 MIC13Q5XKP0 118 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 LHFPL4Q7Z7J7 247 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 R3HDM4Q96D70 268 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 C14orf144Q96I85 54 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 DERL1Q9BUN8 251 aa11.48□□□□□ -0.57
NDEL1-204ENST00000578172 HIST1H1BP16401 226 aaKnown RBP11.47□□□□□ -0.57
NDEL1-204ENST00000578172 PAX5Q02548 391 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 ASCL4Q6XD76 172 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 ODF3L1Q8IXM7 274 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 BCL2L2Q92843 193 aaPredicted RBP11.47□□□□□ -0.57
NDEL1-204ENST00000578172 VAMP8Q9BV40 100 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 C11orf94C9JXX5 98 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 ATP5G3P48201 142 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 VAMP3Q15836 100 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 PRSS8Q16651 343 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 PARLQ9H300 379 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 TOX4O94842 621 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 COX5AP20674 150 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 GATA2P23769 480 aaPredicted RBP11.47□□□□□ -0.57
NDEL1-204ENST00000578172 TAS2R60P59551 318 aa11.47□□□□□ -0.57
NDEL1-204ENST00000578172 ACTR3CQ9C0K3 210 aaPredicted RBP11.47□□□□□ -0.57
NDEL1-204ENST00000578172 WDR61Q9GZS3 305 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms