RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 COA4Q9NYJ1 87 aa15.09■□□□□ 0.01
PRKCA-203ENST00000578063 ST8SIA3O43173 380 aa15.08■□□□□ 0
PRKCA-203ENST00000578063 TXNL1O43396 289 aa15.08■□□□□ 0
PRKCA-203ENST00000578063 NQO2P16083 231 aa15.08■□□□□ 0
PRKCA-203ENST00000578063 USF1P22415 310 aaPredicted RBP15.08■□□□□ 0
PRKCA-203ENST00000578063 NKX2-1P43699 371 aaPredicted RBP15.08■□□□□ 0
PRKCA-203ENST00000578063 ERVK-16P61578 105 aa15.08■□□□□ 0
PRKCA-203ENST00000578063 OR5AN1Q8NGI8 311 aa15.08■□□□□ 0
PRKCA-203ENST00000578063 OR1S1Q8NH92 325 aa15.08■□□□□ 0
PRKCA-203ENST00000578063 RNF126Q9BV68 326 aa15.08■□□□□ 0
PRKCA-203ENST00000578063 CACNG5Q9UF02 275 aa15.08■□□□□ 0
PRKCA-203ENST00000578063 TNFSF18Q9UNG2 199 aa15.08■□□□□ 0
PRKCA-203ENST00000578063 POMT1Q9Y6A1 747 aa15.08■□□□□ 0
PRKCA-203ENST00000578063 H0YIZ8 118 aa15.07■□□□□ 0
PRKCA-203ENST00000578063 PITX3O75364 302 aa15.07■□□□□ 0
PRKCA-203ENST00000578063 DEDDO75618 318 aa15.07■□□□□ 0
PRKCA-203ENST00000578063 CRYZL1O95825 349 aa15.07■□□□□ 0
PRKCA-203ENST00000578063 PRB3Q04118 309 aaPredicted RBP15.07■□□□□ 0
PRKCA-203ENST00000578063 LGALSLQ3ZCW2 172 aaPredicted RBP15.07■□□□□ 0
PRKCA-203ENST00000578063 H2BFWTQ7Z2G1 175 aa15.07■□□□□ 0
PRKCA-203ENST00000578063 DCUN1D4Q92564 292 aa15.07■□□□□ 0
PRKCA-203ENST00000578063 NABP2Q9BQ15 211 aa15.07■□□□□ 0
PRKCA-203ENST00000578063 LSM5Q9Y4Y9 91 aaKnown RBP15.07■□□□□ 0
PRKCA-203ENST00000578063 PTPN13Q12923 2485 aa15.07■□□□□ 0
PRKCA-203ENST00000578063 ODF3BA8MYP8 253 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 H0YJW9 148 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 K7EPK0 472 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 L7N2F9 121 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 TOX4O94842 621 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 ARG1P05089 322 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 MMP9P14780 707 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 C4BPBP20851 252 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 REG1BP48304 166 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 ARHGDIBP52566 201 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 HCP5Q6MZN7 132 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 FOXRED2Q8IWF2 684 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 FAM71E2Q8N5Q1 922 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 MFFQ9GZY8 342 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 PLSCR3Q9NRY6 295 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 OR5AC2Q9NZP5 309 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 BOLA1Q9Y3E2 137 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 INSIG2Q9Y5U4 225 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 FAM90A9PA6NNJ1 464 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 GAPDHP04406 335 aaKnown RBP15.06■□□□□ 0
PRKCA-203ENST00000578063 HOXB4P17483 251 aaPredicted RBP15.06■□□□□ 0
PRKCA-203ENST00000578063 CXCL2P19875 107 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 HTR1DP28221 377 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 RAB13P51153 203 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 DIAPH2-AS1Q14236 149 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 ZNF345Q14585 488 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 Q6ZRM9 215 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 PDPNQ86YL7 162 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 INO80EQ8NBZ0 244 aaPredicted RBP15.06■□□□□ 0
PRKCA-203ENST00000578063 DMBX1Q8NFW5 382 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 RPEQ96AT9 228 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 LPAR2Q9HBW0 351 aa15.06■□□□□ 0
PRKCA-203ENST00000578063 ABCA12Q86UK0 2595 aa15.05■□□□□ 0
PRKCA-203ENST00000578063 OR2F2O95006 317 aa15.05■□□□□ -0
PRKCA-203ENST00000578063 HRASP01112 189 aa15.05■□□□□ -0
PRKCA-203ENST00000578063 MC5RP33032 325 aa15.05■□□□□ -0
PRKCA-203ENST00000578063 CEACAM3P40198 252 aa15.05■□□□□ -0
PRKCA-203ENST00000578063 ID3Q02535 119 aa15.05■□□□□ -0
PRKCA-203ENST00000578063 KLRD1Q13241 179 aa15.05■□□□□ -0
PRKCA-203ENST00000578063 OR2F1Q13607 317 aa15.05■□□□□ -0
PRKCA-203ENST00000578063 IZUMO4Q1ZYL8 232 aa15.05■□□□□ -0
PRKCA-203ENST00000578063 AIFM2Q9BRQ8 373 aa15.05■□□□□ -0
PRKCA-203ENST00000578063 LEUTXA8MZ59 168 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 FAM90A26D6RGX4 464 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 E5RGE8 158 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 LY6LH3BQJ8 138 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 NUP62P37198 522 aaPredicted RBP15.04■□□□□ -0
PRKCA-203ENST00000578063 POU2AF1Q16633 256 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 MIDNQ504T8 468 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 CXorf66Q5JRM2 361 aaPredicted RBP15.04■□□□□ -0
PRKCA-203ENST00000578063 ACOT7LQ6ZUV0 252 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 OSR1Q8TAX0 266 aaPredicted RBP15.04■□□□□ -0
PRKCA-203ENST00000578063 TBX15Q96SF7 602 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 DPM3Q9P2X0 92 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 RCL1Q9Y2P8 373 aaKnown RBP15.04■□□□□ -0
PRKCA-203ENST00000578063 NSG2Q9Y328 171 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 WASHC3Q9Y3C0 194 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 POLQO75417 2590 aa15.04■□□□□ -0
PRKCA-203ENST00000578063 ANKRD17O75179 2603 aaKnown RBP15.04■□□□□ -0
PRKCA-203ENST00000578063 A0A0D9SG52 128 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 RNASEK-C17orf49H0YIS7 233 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 H7C2Y5 167 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 WRBO00258 174 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 PVALBP20472 110 aaPredicted RBP15.03■□□□□ -0
PRKCA-203ENST00000578063 PAX8Q06710 450 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 Q5PR19 223 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 PRSS57Q6UWY2 283 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 C1orf159Q96HA4 380 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.03■□□□□ -0
PRKCA-203ENST00000578063 A0A096LNT2 108 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 RNF222A6NCQ9 220 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 B4DSR2 109 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 IGKV1-16P04430 117 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 MSMBP08118 114 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 TMEM177Q53S58 311 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 TPTE2P1Q5T6R2 138 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms