RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 RD3LP0DJH9 198 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 CD200P41217 278 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 CATR1Q13166 79 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 MSMO1Q15800 293 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 SRSF7Q16629 238 aaKnown RBP eCLIP4.49□□□□□ -1.69
VAPA-203ENST00000577539 CLEC12BQ2HXU8 276 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 RNF212Q495C1 297 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 SSX9Q7RTT3 188 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 ODF3L1Q8IXM7 274 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 KLF14Q8TD94 323 aaPredicted RBP4.49□□□□□ -1.69
VAPA-203ENST00000577539 MAP1LC3B2A6NCE7 125 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 OR5H1A6NKK0 313 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 AP4M1O00189 453 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 RAMP3O60896 148 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 WISP2O76076 250 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 MDKP21741 143 aaPredicted RBP4.48□□□□□ -1.69
VAPA-203ENST00000577539 LINC00205P59089 165 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 ZNF585BQ52M93 769 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 ZNF497Q6ZNH5 498 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 ZNF709Q8N972 641 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 CLDND2Q8NHS1 167 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 GTF3AQ92664 365 aaKnown RBP4.48□□□□□ -1.69
VAPA-203ENST00000577539 RPUSD4Q96CM3 377 aaKnown RBP4.48□□□□□ -1.69
VAPA-203ENST00000577539 GMPPAQ96IJ6 420 aaPredicted RBP4.48□□□□□ -1.69
VAPA-203ENST00000577539 DCTN5Q9BTE1 182 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 CABLES2Q9BTV7 478 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 MAP1LC3BQ9GZQ8 125 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 SLC25A22Q9H936 323 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 PSG11Q9UQ72 335 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 KLF2Q9Y5W3 355 aaPredicted RBP4.48□□□□□ -1.69
VAPA-203ENST00000577539 SMCO3A2RU48 225 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 C5orf52A6NGY3 159 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 C12orf77C9JDV5 145 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 IFNA1P01562 189 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 HBZP02008 142 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 HSPB1P04792 205 aaKnown RBP4.48□□□□□ -1.69
VAPA-203ENST00000577539 S100A8P05109 93 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 CD55P08174 381 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 PGA5P0DJD9 388 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 FOLR2P14207 255 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 S100A2P29034 98 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 PLA2G5P39877 138 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 ADIRFQ15847 76 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 Q3ZCU0 254 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 KHDC3LQ587J8 217 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 VWA1Q6PCB0 445 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 H2BFWTQ7Z2G1 175 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 ZNF525Q8N782 197 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 GLMPQ8WWB7 406 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 AJUBAQ96IF1 538 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 PCNX1Q96RV3 2341 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 TUBA4BQ9H853 241 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 GNG12Q9UBI6 72 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 ARHGAP21Q5T5U3 1957 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 TGIF2-C20orf24A0A0A6YYL0 155 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 SS18L1O75177 396 aaPredicted RBP4.48□□□□□ -1.69
VAPA-203ENST00000577539 S1PR2O95136 353 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 BMP5P22003 454 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 SSTR5P35346 364 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 GLIPR1P48060 266 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 RPL30P62888 115 aaKnown RBP4.48□□□□□ -1.69
VAPA-203ENST00000577539 TRIP6Q15654 476 aaKnown RBP4.48□□□□□ -1.69
VAPA-203ENST00000577539 ZNF506Q5JVG8 444 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 NECAP1Q8NC96 275 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 FDCSPQ8NFU4 85 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 LSM10Q969L4 123 aaKnown RBP4.48□□□□□ -1.69
VAPA-203ENST00000577539 RBKSQ9H477 322 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 SMDT1Q9H4I9 107 aa4.48□□□□□ -1.69
VAPA-203ENST00000577539 TRBV6-6A0A0A6YYG2 114 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 LOC102723971A0A1B0GUV8 181 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 SPAARA0A1B0GVQ0 90 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 C17orf98A8MV24 154 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 BCL2P10415 239 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 FGF7P21781 194 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 DGAT2L7PQ6IED9 249 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 DEFB124Q8NES8 71 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 RNASE8Q8TDE3 154 aaKnown RBP4.47□□□□□ -1.69
VAPA-203ENST00000577539 Q8WTZ3 238 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 MUCL1Q96DR8 90 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 SDSLQ96GA7 329 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 SMIM7Q9BQ49 75 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 SRSF8Q9BRL6 282 aaKnown RBP4.47□□□□□ -1.69
VAPA-203ENST00000577539 EGLN1Q9GZT9 426 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 PCSK5Q92824 1860 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 INTS1Q8N201 2190 aaKnown RBP4.47□□□□□ -1.69
VAPA-203ENST00000577539 WDFY3Q8IZQ1 3526 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 SPTA1P02549 2419 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 ZG16O60844 167 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 CXCL1P09341 107 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 EIF2S3P41091 472 aaKnown RBP4.47□□□□□ -1.69
VAPA-203ENST00000577539 TNFSF10P50591 281 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 EDDM3BP56851 147 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 COL10A1Q03692 680 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 TNFRSF9Q07011 255 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 GABRA6Q16445 453 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 ZNF718Q3SXZ3 478 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 ZNF880Q6PDB4 577 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 HAPLN4Q86UW8 402 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 OR2Z1Q8NG97 314 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 OR10P1Q8NGE3 313 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms