RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ARL3P36405 182 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 MAP2K4P45985 399 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 CBX3Q13185 183 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 PRSS8Q16651 343 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 Q499Y3 187 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 FAM209BQ5JX69 171 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 OR2G6Q5TZ20 316 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 ZNF880Q6PDB4 577 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 IDO2Q6ZQW0 420 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 KIR2DL5AQ8N109 375 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 PTX4Q96A99 478 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 PLA2G2EQ9NZK7 142 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 ORC6Q9Y5N6 252 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 S4R3C0 116 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 DYNC1I1O14576 645 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 SCTP09683 121 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 FCGR2BP31994 310 aaPredicted RBP12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 TCTAP57738 103 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 ZNF585BQ52M93 769 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 OR10K2Q6IF99 312 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 CLEC19AQ6UXS0 136 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 CDH26Q8IXH8 852 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 SMIM19Q96E16 107 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 Q96MT0 163 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 FBXL7Q9UJT9 491 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 APLNQ9ULZ1 77 aa12.01□□□□□ -0.49
CTDNEP1-211ENST00000575783 HERC1Q15751 4861 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 TRAV25A0A0B4J276 109 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 OGG1O15527 345 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 FCGR1AP12314 374 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 GABRB1P18505 474 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 HTR2CP28335 458 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 ETV1P50549 477 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 VMA21Q3ZAQ7 101 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 TMEM177Q53S58 311 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 TMPRSS11AQ6ZMR5 421 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 MOB1BQ7L9L4 216 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 TTC9CQ8N5M4 171 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 GVQW1Q8N7I0 195 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 TEX45Q8NA69 505 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 CCDC197Q8NCU1 140 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 CENPNQ96H22 339 aaPredicted RBP12□□□□□ -0.49
CTDNEP1-211ENST00000575783 SPIN2AQ99865 258 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 RARRES2Q99969 163 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 SPIN2BQ9BPZ2 258 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 HDHD3Q9BSH5 251 aaPredicted RBP12□□□□□ -0.49
CTDNEP1-211ENST00000575783 BABAM2Q9NXR7 383 aa12□□□□□ -0.49
CTDNEP1-211ENST00000575783 HSPG2P98160 4391 aa11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 ACTL6BO94805 426 aa11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 RPS11P62280 158 aaKnown RBP eCLIP11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 HLA-DRB3P79483 266 aa11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 MED22Q15528 200 aa11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 OR4A47Q6IF82 309 aa11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 C19orf35Q6ZS72 473 aa11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 MAP6D1Q9H9H5 199 aa11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 PLEKHJ1Q9NW61 149 aa11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 RDH8Q9NYR8 311 aa11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 GHRLQ9UBU3 117 aa11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 RPL36Q9Y3U8 105 aaKnown RBP11.99□□□□□ -0.49
CTDNEP1-211ENST00000575783 TRBV5-7A0A0A0MS05 114 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 A8MWP6 167 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 DEFB4AO15263 64 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 LALBAP00709 142 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 ALPLP05186 524 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 UBE2KP61086 200 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 RPS27AP62979 156 aaKnown RBP11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 TAGLNQ01995 201 aaKnown RBP11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 RTL8BQ17RB0 113 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 YIF1BQ5BJH7 314 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 C10orf55Q5SWW7 151 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 GLT8D1Q68CQ7 371 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 ZFP41Q8N8Y5 198 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 OR5B3Q8NH48 314 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 RHOXF1Q8NHV9 184 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 NICN1Q9BSH3 213 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 SDHAF2Q9NX18 166 aa11.98□□□□□ -0.49
CTDNEP1-211ENST00000575783 HMX3A6NHT5 357 aa11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 MFAP2P55001 183 aa11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 UNQ9165/PRO28630Q6UXU0 137 aa11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 SLC25A42Q86VD7 318 aa11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 CCDC140Q96MF4 163 aa11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 SPAG8Q99932 426 aaPredicted RBP11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 UQCC2Q9BRT2 126 aa11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 TMEM59Q9BXS4 323 aa11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 OR2D2Q9H210 308 aa11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 RIMS4Q9H426 269 aaPredicted RBP11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 ZNF430Q9H8G1 570 aaPredicted RBP11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 MRPS18AQ9NVS2 196 aaKnown RBP11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 AK3Q9UIJ7 227 aa11.97□□□□□ -0.49
CTDNEP1-211ENST00000575783 IGKV1-6A0A0C4DH72 117 aa11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 EI24O14681 340 aa11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 S1PR2O95136 353 aa11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 CRYZL1O95825 349 aa11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 MED21Q13503 144 aa11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 ODF3L2Q3SX64 289 aa11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 OR11H2Q8NH07 326 aa11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 MARC2Q969Z3 335 aa11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 SLC7A6OSQ96CW6 309 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms