RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PEX14O75381 377 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 PGLYRP1O75594 196 aaPredicted RBP11.14□□□□□ -0.63
RPAIN-217ENST00000575711 TSPAN9O75954 239 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 CRYZL1O95825 349 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 RLN1P04808 185 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 F2RL1P55085 397 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
RPAIN-217ENST00000575711 RELBQ01201 579 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 SURF2Q15527 256 aaPredicted RBP11.14□□□□□ -0.63
RPAIN-217ENST00000575711 C11orf88Q6PI97 169 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 Q6ZSV7 163 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 C5orf56Q8N8D9 126 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 POC5Q8NA72 575 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 OR13C8Q8NGS7 320 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 OR4F5Q8NH21 305 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 OR51H1Q8NH63 302 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 OR4S2Q8NH73 311 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 MARCH1Q8TCQ1 289 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 TAF15Q92804 592 aaKnown RBP eCLIP11.14□□□□□ -0.63
RPAIN-217ENST00000575711 RITA1Q96K30 269 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 HARBI1Q96MB7 349 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 TSNAXQ99598 290 aaKnown RBP11.14□□□□□ -0.63
RPAIN-217ENST00000575711 RASL11BQ9BPW5 248 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 PLSCR3Q9NRY6 295 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
RPAIN-217ENST00000575711 C2CD3Q4AC94 2353 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 LINC00854A0A1B0GVQ3 168 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 NAP1L6A6NFF2 107 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 SHOXO15266 292 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 SPDEFO95238 335 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 AMY1AP04745 511 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 CNTFRP26992 372 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 LGALS7P47929 136 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 BLCAPP62952 87 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 FOXL1Q12952 345 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 TMEM177Q53S58 311 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 SPAG16Q8N0X2 631 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 Q8N9W7 124 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 NPBQ8NG41 125 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 OSR1Q8TAX0 266 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-217ENST00000575711 MRGPRFQ96AM1 343 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 SCGB3A2Q96PL1 93 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 C7orf50Q9BRJ6 194 aaKnown RBP11.13□□□□□ -0.63
RPAIN-217ENST00000575711 SLC2A9Q9NRM0 540 aa11.13□□□□□ -0.63
RPAIN-217ENST00000575711 LIN7CQ9NUP9 197 aaKnown RBP11.13□□□□□ -0.63
RPAIN-217ENST00000575711 C14orf166Q9Y224 244 aaKnown RBP11.13□□□□□ -0.63
RPAIN-217ENST00000575711 TMEM89A2RUT3 159 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 NDUFA3O95167 84 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 CTSDP07339 412 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-217ENST00000575711 PI3P19957 117 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 PIGPP57054 158 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 RND3P61587 244 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 PLGLAQ15195 96 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 KRTAP21-3Q3LHN1 58 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 ARSJQ5FYB0 599 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-217ENST00000575711 C9orf152Q5JTZ5 239 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 TBC1D26Q86UD7 250 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 FAM71E2Q8N5Q1 922 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 CCDC71LQ8N9Z2 235 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 OR2T6Q8NHC8 308 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 CD300LFQ8TDQ1 290 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 C16orf95Q9H693 158 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 ZNF702PQ9H963 129 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 BEX1Q9HBH7 125 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 COPZ2Q9P299 210 aa11.12□□□□□ -0.63
RPAIN-217ENST00000575711 A0A1B0GUS0 222 aa11.11□□□□□ -0.63
RPAIN-217ENST00000575711 SH2D7A6NKC9 451 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-217ENST00000575711 RRHO14718 337 aa11.11□□□□□ -0.63
RPAIN-217ENST00000575711 MPPED1O15442 326 aa11.11□□□□□ -0.63
RPAIN-217ENST00000575711 RBFOX2O43251 390 aaKnown RBP eCLIP11.11□□□□□ -0.63
RPAIN-217ENST00000575711 F2RP25116 425 aa11.11□□□□□ -0.63
RPAIN-217ENST00000575711 PSG5Q15238 335 aa11.11□□□□□ -0.63
RPAIN-217ENST00000575711 C5orf64Q2M2E5 130 aa11.11□□□□□ -0.63
RPAIN-217ENST00000575711 Q8N2B8 174 aa11.11□□□□□ -0.63
RPAIN-217ENST00000575711 TCTEX1D1Q8N7M0 179 aa11.11□□□□□ -0.63
RPAIN-217ENST00000575711 SLC25A21Q9BQT8 299 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-217ENST00000575711 METTL1Q9UBP6 276 aaKnown RBP11.11□□□□□ -0.63
RPAIN-217ENST00000575711 GPR132Q9UNW8 380 aa11.11□□□□□ -0.63
RPAIN-217ENST00000575711 CLPSL1A2RUU4 121 aa11.1□□□□□ -0.63
RPAIN-217ENST00000575711 SLC25A17O43808 307 aa11.1□□□□□ -0.63
RPAIN-217ENST00000575711 RAMP3O60896 148 aa11.1□□□□□ -0.63
RPAIN-217ENST00000575711 UPK1BO75841 260 aa11.1□□□□□ -0.63
RPAIN-217ENST00000575711 HPRT1P00492 218 aa11.1□□□□□ -0.63
RPAIN-217ENST00000575711 MDKP21741 143 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-217ENST00000575711 BRWD1-AS2P59051 145 aa11.1□□□□□ -0.63
RPAIN-217ENST00000575711 RBMS2Q15434 407 aaKnown RBP11.1□□□□□ -0.63
RPAIN-217ENST00000575711 VMA21Q3ZAQ7 101 aa11.1□□□□□ -0.63
RPAIN-217ENST00000575711 LINC01006Q8NI28 216 aa11.1□□□□□ -0.63
RPAIN-217ENST00000575711 RTBDNQ9BSG5 229 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-217ENST00000575711 FBXL15Q9H469 300 aa11.1□□□□□ -0.63
RPAIN-217ENST00000575711 C5orf66Q9H5L9 145 aa11.1□□□□□ -0.63
RPAIN-217ENST00000575711 SRRM4A7MD48 611 aaKnown RBP11.09□□□□□ -0.63
RPAIN-217ENST00000575711 LYRM1O43325 122 aa11.09□□□□□ -0.63
RPAIN-217ENST00000575711 HRASP01112 189 aa11.09□□□□□ -0.63
RPAIN-217ENST00000575711 IGLV2-23P01705 113 aa11.09□□□□□ -0.63
RPAIN-217ENST00000575711 VDAC2P45880 294 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-217ENST00000575711 CCR6P51684 374 aa11.09□□□□□ -0.63
RPAIN-217ENST00000575711 UBE2KP61086 200 aa11.09□□□□□ -0.63
RPAIN-217ENST00000575711 AWAT1Q58HT5 328 aa11.09□□□□□ -0.63
RPAIN-217ENST00000575711 LIN54Q6MZP7 749 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms