RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 FAM182AQ5T1J6 154 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 CASC10Q5T4H9 136 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 C2orf66Q6UXQ4 117 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 Q6ZS49 121 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 OR52R1Q8NGF1 315 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 SLC25A40Q8TBP6 338 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 RTN4IP1Q8WWV3 396 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 PGLYRP2Q96PD5 576 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 SMIM14Q96QK8 99 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 NRIP2Q9BQI9 281 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 PRADC1Q9BSG0 188 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 PSMG3Q9BT73 122 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 RTL8AQ9BWD3 113 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 IMUPQ9GZP8 106 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 MED28Q9H204 178 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 Q9H3A6 140 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 JPT2Q9H910 190 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 TAAR3PQ9P1P4 343 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 RPUSD1Q9UJJ7 312 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 PROCRQ9UNN8 238 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 TCOF1Q13428 1488 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 TECPR2O15040 1411 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 ITGB4P16144 1822 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 MYH10P35580 1976 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 A0A1B0GW64 132 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 B4DEV8 164 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 M0R381 172 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 UCHL1P09936 223 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 PGAM2P15259 253 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 IMPA1P29218 277 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 CXCL12P48061 93 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 TAS2R20P59543 309 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 DEFA3P59666 94 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 GABARAPL2P60520 117 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 NHLRC3Q5JS37 347 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 GLYATL3Q5SZD4 288 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 LYRM7Q5U5X0 104 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 GLT8D1Q68CQ7 371 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 DNAJC24Q6P3W2 148 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 HRCT1Q6UXD1 115 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 LCNL1Q6ZST4 164 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF584Q8IVC4 421 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF664Q8N3J9 261 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 TCTEX1D1Q8N7M0 179 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 SFT2D1Q8WV19 159 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 SLAMF6Q96DU3 332 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 HSD17B10Q99714 261 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 THTPAQ9BU02 230 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF436Q9C0F3 470 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 OR2J1Q9GZK6 312 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 CST9LQ9H4G1 147 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 CXorf21Q9HAI6 301 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 FBXL12Q9NXK8 326 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 NUFIP1Q9UHK0 495 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 BAIAP2Q9UQB8 552 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 CYSLTR1Q9Y271 337 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 COQ4Q9Y3A0 265 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 BCL9LQ86UU0 1499 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 BAZ2AQ9UIF9 1905 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 MYH2Q9UKX2 1941 aa3.77□□□□□ -1.81
TOPBP1-210ENST00000572787 SIGLEC1Q9BZZ2 1709 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 CECR2Q9BXF3 1484 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 IGHV3OR16-10A0A075B7F0 116 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 TRAV19A0A0A6YYK7 116 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 TRDV1A0A1B0GX56 115 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 CLDN25C9JDP6 229 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 BCL2L11O43521 198 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 HLA-DPB1P04440 258 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 TWIST1Q15672 202 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 STPG1Q5TH74 334 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 FKBP1CQ5VVH2 108 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 LRP11Q86VZ4 500 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF695Q8IW36 515 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 LYG1Q8N1E2 194 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 SLC22A24Q8N4F4 322 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 YIPF7Q8N8F6 280 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 OR10D4PQ8NGN7 298 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 ABHD14BQ96IU4 210 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 C2orf50Q96LR7 162 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 TIMM17AQ99595 171 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 CCL13Q99616 98 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 CHCHD5Q9BSY4 110 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 EFCAB1Q9HAE3 211 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 OR5AC2Q9NZP5 309 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 AK3Q9UIJ7 227 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 TNFSF18Q9UNG2 199 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 AMMECR1Q9Y4X0 333 aaPredicted RBP3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 ATRNO75882 1429 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 FMN1Q68DA7 1419 aa3.76□□□□□ -1.81
TOPBP1-210ENST00000572787 ARHGEF11O15085 1522 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 DHRS12A0PJE2 317 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 C4orf51C9J302 202 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 C9JQL5 133 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 LMX1BO60663 402 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 P0DMU3 169 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 FAM231AP0DMU4 169 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 FAM231CP0DMU5 169 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 OPRM1P35372 400 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 OPRK1P41145 380 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 COPZ1P61923 177 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms