RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 RTL8BQ17RB0 113 aa17.53■□□□□ 0.4
RAB40B-207ENST00000572603 PHLDA2Q53GA4 152 aa17.53■□□□□ 0.4
RAB40B-207ENST00000572603 LPCAT3Q6P1A2 487 aa17.53■□□□□ 0.4
RAB40B-207ENST00000572603 IDO2Q6ZQW0 420 aa17.53■□□□□ 0.4
RAB40B-207ENST00000572603 OR4C13Q8NGP0 309 aa17.53■□□□□ 0.4
RAB40B-207ENST00000572603 C16orf95Q9H693 158 aa17.53■□□□□ 0.4
RAB40B-207ENST00000572603 RNF212BA8MTL3 300 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 NBR2O15453 112 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 PLXNB1O43157 2135 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 FCGR3BO75015 233 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 IGLV2-23P01705 113 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 RLN1P04808 185 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 RRASP10301 218 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 PGAM2P15259 253 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 PI3P19957 117 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 RND3P61587 244 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 ZNF846Q147U1 533 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 OR51H1Q8NH63 302 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 ZNF486Q96H40 463 aaPredicted RBP17.52■□□□□ 0.4
RAB40B-207ENST00000572603 MDFIQ99750 246 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 RNF5Q99942 180 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 SLC2A9Q9NRM0 540 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 PRELID3BQ9Y3B1 194 aa17.52■□□□□ 0.4
RAB40B-207ENST00000572603 CRYZL1O95825 349 aa17.51■□□□□ 0.39
RAB40B-207ENST00000572603 ANK2Q01484 3957 aa17.51■□□□□ 0.39
RAB40B-207ENST00000572603 CATR1Q13166 79 aa17.51■□□□□ 0.39
RAB40B-207ENST00000572603 SURF2Q15527 256 aaPredicted RBP17.51■□□□□ 0.39
RAB40B-207ENST00000572603 ABCA11PQ4W5N1 156 aa17.51■□□□□ 0.39
RAB40B-207ENST00000572603 CMTM1Q8IZ96 169 aa17.51■□□□□ 0.39
RAB40B-207ENST00000572603 FLYWCH2Q96CP2 140 aaKnown RBP17.51■□□□□ 0.39
RAB40B-207ENST00000572603 HARBI1Q96MB7 349 aa17.51■□□□□ 0.39
RAB40B-207ENST00000572603 LIN7CQ9NUP9 197 aaKnown RBP17.51■□□□□ 0.39
RAB40B-207ENST00000572603 SCP2D1Q9UJQ7 156 aa17.51■□□□□ 0.39
RAB40B-207ENST00000572603 SIGLEC9Q9Y336 463 aa17.51■□□□□ 0.39
RAB40B-207ENST00000572603 STAB1Q9NY15 2570 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 NCBP2LA6PVI3 153 aaKnown RBP17.5■□□□□ 0.39
RAB40B-207ENST00000572603 SRRM4A7MD48 611 aaKnown RBP17.5■□□□□ 0.39
RAB40B-207ENST00000572603 RAMP3O60896 148 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 PEX14O75381 377 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 SPDEFO95238 335 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 CTSDP07339 412 aaPredicted RBP17.5■□□□□ 0.39
RAB40B-207ENST00000572603 VSIG10L2P0DP72 767 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 MDKP21741 143 aaPredicted RBP17.5■□□□□ 0.39
RAB40B-207ENST00000572603 BTCP35070 178 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 ECI1P42126 302 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 KIR2DS2P43631 304 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 INPP1P49441 399 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 OR4S2Q8NH73 311 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 LINC01006Q8NI28 216 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 PRSS22Q9GZN4 317 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 VSIG4Q9Y279 399 aa17.5■□□□□ 0.39
RAB40B-207ENST00000572603 RRHO14718 337 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 PLA2G10O15496 165 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 RBFOX2O43251 390 aaKnown RBP eCLIP17.49■□□□□ 0.39
RAB40B-207ENST00000572603 RPS16P62249 146 aaKnown RBP17.49■□□□□ 0.39
RAB40B-207ENST00000572603 CBX3Q13185 183 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 PSG5Q15238 335 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 C5orf64Q2M2E5 130 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 TMEM95Q3KNT9 176 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 TBC1D26Q86UD7 250 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 SPAG16Q8N0X2 631 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 OR4F5Q8NH21 305 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 OSR1Q8TAX0 266 aaPredicted RBP17.49■□□□□ 0.39
RAB40B-207ENST00000572603 TSNAXQ99598 290 aaKnown RBP17.49■□□□□ 0.39
RAB40B-207ENST00000572603 RTBDNQ9BSG5 229 aaPredicted RBP17.49■□□□□ 0.39
RAB40B-207ENST00000572603 FBXL15Q9H469 300 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 C5orf66Q9H5L9 145 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 TPSG1Q9NRR2 321 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 GPR132Q9UNW8 380 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 MMP24Q9Y5R2 645 aa17.49■□□□□ 0.39
RAB40B-207ENST00000572603 TNCP24821 2201 aa17.48■□□□□ 0.39
RAB40B-207ENST00000572603 LINC00854A0A1B0GVQ3 168 aa17.48■□□□□ 0.39
RAB40B-207ENST00000572603 CRYGBP07316 175 aa17.48■□□□□ 0.39
RAB40B-207ENST00000572603 F2RP25116 425 aa17.48■□□□□ 0.39
RAB40B-207ENST00000572603 COMPP49747 757 aaPredicted RBP17.48■□□□□ 0.39
RAB40B-207ENST00000572603 PIGPP57054 158 aa17.48■□□□□ 0.39
RAB40B-207ENST00000572603 ZFAND1Q8TCF1 268 aa17.48■□□□□ 0.39
RAB40B-207ENST00000572603 HSPB9Q9BQS6 159 aa17.48■□□□□ 0.39
RAB40B-207ENST00000572603 C7orf50Q9BRJ6 194 aaKnown RBP17.48■□□□□ 0.39
RAB40B-207ENST00000572603 SERTAD4Q9NUC0 356 aa17.48■□□□□ 0.39
RAB40B-207ENST00000572603 NAP1L6A6NFF2 107 aa17.47■□□□□ 0.39
RAB40B-207ENST00000572603 SHOXO15266 292 aa17.47■□□□□ 0.39
RAB40B-207ENST00000572603 LGALS7P47929 136 aa17.47■□□□□ 0.39
RAB40B-207ENST00000572603 IFITM3Q01628 133 aa17.47■□□□□ 0.39
RAB40B-207ENST00000572603 FOXL1Q12952 345 aa17.47■□□□□ 0.39
RAB40B-207ENST00000572603 ZNF585BQ52M93 769 aa17.47■□□□□ 0.39
RAB40B-207ENST00000572603 AWAT1Q58HT5 328 aa17.47■□□□□ 0.39
RAB40B-207ENST00000572603 KIAA1456Q9P272 454 aa17.47■□□□□ 0.39
RAB40B-207ENST00000572603 CLPSL1A2RUU4 121 aa17.46■□□□□ 0.39
RAB40B-207ENST00000572603 SLC25A17O43808 307 aa17.46■□□□□ 0.39
RAB40B-207ENST00000572603 UPK1BO75841 260 aa17.46■□□□□ 0.39
RAB40B-207ENST00000572603 HLA-DRB1P01911 266 aa17.46■□□□□ 0.39
RAB40B-207ENST00000572603 MRGPRG-AS1Q2M3A8 158 aa17.46■□□□□ 0.39
RAB40B-207ENST00000572603 TCTEX1D1Q8N7M0 179 aa17.46■□□□□ 0.39
RAB40B-207ENST00000572603 TMEM230Q96A57 120 aa17.46■□□□□ 0.39
RAB40B-207ENST00000572603 RASL11BQ9BPW5 248 aa17.46■□□□□ 0.39
RAB40B-207ENST00000572603 METTL1Q9UBP6 276 aaKnown RBP17.46■□□□□ 0.39
RAB40B-207ENST00000572603 TBC1D24Q9ULP9 559 aa17.46■□□□□ 0.39
RAB40B-207ENST00000572603 MPPED1O15442 326 aa17.45■□□□□ 0.38
RAB40B-207ENST00000572603 S1PR2O95136 353 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms