RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 RPL31P62899 125 aaKnown RBP13.59□□□□□ -0.23
RAB40B-206ENST00000571995 SRSF4Q08170 494 aaKnown RBP13.59□□□□□ -0.23
RAB40B-206ENST00000571995 PEAR1Q5VY43 1037 aaPredicted RBP13.59□□□□□ -0.23
RAB40B-206ENST00000571995 HIST1H2BAQ96A08 127 aa13.59□□□□□ -0.23
RAB40B-206ENST00000571995 QTRT1Q9BXR0 403 aaKnown RBP13.59□□□□□ -0.23
RAB40B-206ENST00000571995 ANAPC10Q9UM13 185 aa13.59□□□□□ -0.23
RAB40B-206ENST00000571995 MRPS18CQ9Y3D5 142 aaKnown RBP13.59□□□□□ -0.23
RAB40B-206ENST00000571995 NUDT19A8MXV4 375 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 MDH2P40926 338 aaKnown RBP13.58□□□□□ -0.24
RAB40B-206ENST00000571995 RTP5Q14D33 572 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 ACSM6Q6P461 480 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 EIF4E3Q8N5X7 224 aaKnown RBP13.58□□□□□ -0.24
RAB40B-206ENST00000571995 WFIKKN1Q96NZ8 548 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 COMMD5Q9GZQ3 224 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 LPAR2Q9HBW0 351 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 REG1AP05451 166 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 GATA2P23769 480 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-206ENST00000571995 EGLN1Q9GZT9 426 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 RNF7Q9UBF6 113 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 KALRNO60229 2985 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 NAV3Q8IVL0 2385 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 TNFRSF9Q07011 255 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 C1orf185Q5T7R7 199 aa13.58□□□□□ -0.24
RAB40B-206ENST00000571995 MRPL37Q9BZE1 423 aaKnown RBP13.58□□□□□ -0.24
RAB40B-206ENST00000571995 TNRC6AQ8NDV7 1962 aaKnown RBP13.58□□□□□ -0.24
RAB40B-206ENST00000571995 KIAA1549Q9HCM3 1950 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 RAB31Q13636 194 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 HMGN3Q15651 99 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 Q6P435 159 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 SGK494Q96LW2 274 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 GINS3Q9BRX5 216 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 ZDHHC11Q9H8X9 412 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 NKX6-3A6NJ46 265 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 H7BYZ3 331 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 COX5AP20674 150 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 RBPJQ06330 500 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 Q6ZR03 302 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 MOB3BQ86TA1 216 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 PRR7Q8TB68 274 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 RCC1LQ96I51 464 aaKnown RBP13.57□□□□□ -0.24
RAB40B-206ENST00000571995 TMEM56Q96MV1 263 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 TMEM56-RWDD3S4R434 201 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 P2RY6Q15077 328 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 ZNF474Q6S9Z5 364 aaPredicted RBP13.57□□□□□ -0.24
RAB40B-206ENST00000571995 SAXO1Q8IYX7 474 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 NEUROG1Q92886 237 aa13.57□□□□□ -0.24
RAB40B-206ENST00000571995 ID3Q02535 119 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 IL15RAQ13261 267 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 NMSQ5H8A3 153 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 MIC13Q5XKP0 118 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 PRR27Q6MZM9 219 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 ASCL4Q6XD76 172 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 ZNF497Q6ZNH5 498 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 HSD17B10Q99714 261 aaKnown RBP13.56□□□□□ -0.24
RAB40B-206ENST00000571995 IGKV1-39P01597 117 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 IGKV1D-39P04432 117 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 SNX22Q96L94 193 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 ASCL3Q9NQ33 180 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 ABCA12Q86UK0 2595 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A10PA6NDY2 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A18PA6NE21 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A16PA6NEW6 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A20PA6NIJ5 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A8PA6NJQ4 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A7PA6NKC0 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A22PA8MWA6 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A12PA8MX19 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A5PA8MXJ8 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A23PA8MXZ1 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 MT-ND4LP03901 98 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A15PP0C7V4 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A13PP0C7W8 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A14PP0C7W9 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM90A24PP0C7X0 464 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 RPS23P62266 143 aaKnown RBP13.56□□□□□ -0.24
RAB40B-206ENST00000571995 SLC35B1P78383 322 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 FAM216AQ8WUB2 273 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 TAF15Q92804 592 aaKnown RBP eCLIP13.56□□□□□ -0.24
RAB40B-206ENST00000571995 COQ2Q96H96 371 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 CALYQ9NYX4 217 aa13.56□□□□□ -0.24
RAB40B-206ENST00000571995 TRAV3A0A0B4J244 114 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 PGPEP1LA6NFU8 196 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 ZNF98A6NK75 572 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 LINC00473A8K010 186 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 H3BTX0 84 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 CNIH1O95406 144 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 TRGC2P03986 189 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 ACTR3CQ9C0K3 210 aaPredicted RBP13.55□□□□□ -0.24
RAB40B-206ENST00000571995 PLSCR2Q9NRY7 297 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 SLC35D1Q9NTN3 355 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 OR10J4P0C629 311 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 CD177Q8N6Q3 437 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 OR51G1Q8NGK1 321 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 SPRY4Q9C004 299 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 CTRB1P17538 263 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 GZMHP20718 246 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 CTRB2Q6GPI1 263 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 ZNF561Q8N587 486 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 ZNF645Q8N7E2 425 aa13.55□□□□□ -0.24
RAB40B-206ENST00000571995 WDR31Q8NA23 367 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms