RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 AMTNQ6UX39 209 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 LRRN1Q6UXK5 716 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 COMMD7Q86VX2 200 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 OR2D3Q8NGH3 330 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 EEF1AKMT1Q8WVE0 214 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 C12orf43Q96C57 262 aaKnown RBP1.33□□□□□ -2.2
CDC27-212ENST00000570818 MS4A6EQ96DS6 147 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 ANKRD36BP1Q96IX9 119 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 MBOAT7Q96N66 472 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 GNB1LQ9BYB4 327 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 MRPS26Q9BYN8 205 aaKnown RBP1.33□□□□□ -2.2
CDC27-212ENST00000570818 PARVGQ9HBI0 331 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 HES4Q9HCC6 221 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 SLC2A9Q9NRM0 540 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 FKBP14Q9NWM8 211 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 TXNL4BQ9NX01 149 aaKnown RBP1.33□□□□□ -2.2
CDC27-212ENST00000570818 UBAP1Q9NZ09 502 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 DKKL1Q9UK85 242 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 POLR1DQ9Y2S0 133 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 AMMECR1Q9Y4X0 333 aaPredicted RBP1.33□□□□□ -2.2
CDC27-212ENST00000570818 SDK1Q7Z5N4 2213 aa1.33□□□□□ -2.2
CDC27-212ENST00000570818 RTEL1-TNFRSF6BF6WH68 1400 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 COL18A1P39060 1754 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 A0A0G2JQZ4 141 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 GRIFINA4D1Z8 144 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 SMIM23A6NLE4 172 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 M0R381 172 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 CXCR6O00574 342 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 HLA-DQB2P05538 268 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 IL3P08700 152 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 NPPCP23582 126 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 CRHBPP24387 322 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 RPS12P25398 132 aaKnown RBP1.32□□□□□ -2.2
CDC27-212ENST00000570818 DDTP30046 118 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 KRTAP10-4P60372 401 aaPredicted RBP1.32□□□□□ -2.2
CDC27-212ENST00000570818 RPS24P62847 133 aaKnown RBP1.32□□□□□ -2.2
CDC27-212ENST00000570818 GNA12Q03113 381 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 JOSD1Q15040 202 aaPredicted RBP1.32□□□□□ -2.2
CDC27-212ENST00000570818 RSU1Q15404 277 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 FAM229BQ4G0N7 80 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 HIST2H3AQ71DI3 136 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 C1orf174Q8IYL3 243 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 LRRC34Q8IZ02 419 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 UBL4BQ8N7F7 174 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 FNDC9Q8TBE3 224 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 C16orf78Q8WTQ4 265 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 RNF133Q8WVZ7 376 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 RAB8BQ92930 207 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 TMA16Q96EY4 203 aaKnown RBP1.32□□□□□ -2.2
CDC27-212ENST00000570818 UPK3BQ9BT76 320 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 NKX6-2Q9C056 277 aaPredicted RBP1.32□□□□□ -2.2
CDC27-212ENST00000570818 BABAM2Q9NXR7 383 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 MINOS1-NBL1R4GNA1 71 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 V9GYY5 206 aaPredicted RBP1.32□□□□□ -2.2
CDC27-212ENST00000570818 CHD5Q8TDI0 1954 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 THSD7AQ9UPZ6 1657 aa1.32□□□□□ -2.2
CDC27-212ENST00000570818 SLC17A3O00476 420 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 MT-CO2P00403 227 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 HLA-DRAP01903 254 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 CALB1P05937 261 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 MYL12AP19105 171 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 SERPINB10P48595 397 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 CTBP2P56545 445 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 UAP1Q16222 522 aaPredicted RBP1.31□□□□□ -2.2
CDC27-212ENST00000570818 BATFQ16520 125 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 COQ5Q5HYK3 327 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 CLVS2Q5SYC1 327 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 FAM78BQ5VT40 261 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 LPCAT4Q643R3 524 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 TMEM161BQ8NDZ6 487 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 JOSD2Q8TAC2 188 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 HAVCR2Q8TDQ0 301 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 CPNE2Q96FN4 548 aaPredicted RBP1.31□□□□□ -2.2
CDC27-212ENST00000570818 SLC35G5Q96KT7 338 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 Q9BRP9 147 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 MIEN1Q9BRT3 115 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 SPZ1Q9BXG8 430 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 C11orf1Q9H5F2 150 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 NDUFB11Q9NX14 153 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 C3orf18Q9UK00 162 aa1.31□□□□□ -2.2
CDC27-212ENST00000570818 ADAMTSL1Q8N6G6 1762 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 OR11H12B2RN74 326 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 C21orf140B9A014 251 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 ACOX3O15254 700 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 AHSA1O95433 338 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 TNNC2P02585 160 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 ISG15P05161 165 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 REG1AP05451 166 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 UCHL3P15374 230 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 CRYBB3P26998 211 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 CCR7P32248 378 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 UBE2IP63279 158 aaKnown RBP1.3□□□□□ -2.2
CDC27-212ENST00000570818 HOXC5Q00444 222 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 ITGB3BPQ13352 177 aaPredicted RBP1.3□□□□□ -2.2
CDC27-212ENST00000570818 C1orf195Q5TG92 126 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 OR10K2Q6IF99 312 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 CD200R1LQ6Q8B3 271 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 C10orf67Q8IYJ2 551 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 DAND5Q8N907 189 aa1.3□□□□□ -2.2
CDC27-212ENST00000570818 OR11H2Q8NH07 326 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms