RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 OR1L6Q8NGR2 347 aa12.95□□□□□ -0.34
SMG6-207ENST00000570756 TRAV39A0A0B4J263 110 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 TRAV38-1A0A0B4J264 116 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 TRAPPC6AO75865 159 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 TDGF1P13385 188 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 CATR1Q13166 79 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 SPATA45Q537H7 98 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 MRPL14Q6P1L8 145 aaKnown RBP12.94□□□□□ -0.34
SMG6-207ENST00000570756 ZNF497Q6ZNH5 498 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 ZNF645Q8N7E2 425 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 OR10D3Q8NH80 312 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 ORAOV1Q8WV07 137 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 PKIBQ9C010 78 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 MPC1Q9Y5U8 109 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 RAMP3O60896 148 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 TRA2AQ13595 282 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMG6-207ENST00000570756 MMDQ15546 238 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 OCC1Q8TAD7 63 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 GAL3ST2Q9H3Q3 398 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 ZNF703Q9H7S9 590 aaPredicted RBP12.94□□□□□ -0.34
SMG6-207ENST00000570756 FBXL7Q9UJT9 491 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 WDR83OSQ9Y284 106 aa12.94□□□□□ -0.34
SMG6-207ENST00000570756 IGHV1-45A0A0A0MS14 117 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 MPDU1O75352 247 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 RBMXL2O75526 392 aaKnown RBP12.93□□□□□ -0.34
SMG6-207ENST00000570756 CXorf1O96002 111 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 GPX1P07203 203 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 RAC2P15153 192 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 CTRLP40313 264 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 ZNF816Q0VGE8 651 aaPredicted RBP12.93□□□□□ -0.34
SMG6-207ENST00000570756 HLA-BQ31612 363 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 Q6P435 159 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 ZDHHC16Q969W1 377 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 TXN2Q99757 166 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 LRFN3Q9BTN0 628 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 WDR54Q9H977 334 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 SNURFLB1AK76 121 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 CCL2P13500 99 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 CD1BP29016 333 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 LGALS4P56470 323 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 RPEL1Q2QD12 228 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 STARD4Q96DR4 205 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 TMEM204Q9BSN7 226 aa12.93□□□□□ -0.34
SMG6-207ENST00000570756 RAB29O14966 203 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 CLDN14O95500 239 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 IGHV3-9P01782 118 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 OR5G3P0C626 314 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 ARL14EPLP0DKL9 152 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 IER3P46695 156 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 THBS3P49746 956 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 HNRNPA3P51991 378 aaKnown RBP12.92□□□□□ -0.34
SMG6-207ENST00000570756 PTTG1IPP53801 180 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 EDDM3BP56851 147 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 RPS16P62249 146 aaKnown RBP12.92□□□□□ -0.34
SMG6-207ENST00000570756 COTL1Q14019 142 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 TRIP6Q15654 476 aaKnown RBP12.92□□□□□ -0.34
SMG6-207ENST00000570756 SAPCD1Q5SSQ6 148 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 LEMD1Q68G75 181 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 H2BFWTQ7Z2G1 175 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 TMEM45BQ96B21 275 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 FAM103A1Q9BTL3 118 aaKnown RBP12.92□□□□□ -0.34
SMG6-207ENST00000570756 GNB1LQ9BYB4 327 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 SCO2A0A1W2PP80 73 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 SS18L1O75177 396 aaPredicted RBP12.92□□□□□ -0.34
SMG6-207ENST00000570756 ZNF253O75346 499 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 MT-ND6P03923 174 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 HNF1AP20823 631 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 ARF1P84077 181 aaKnown RBP12.92□□□□□ -0.34
SMG6-207ENST00000570756 TGFBR3Q03167 851 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 HLA-DRB5Q30154 266 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 GCSAMLQ5JQS6 135 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 Q6ZN92 141 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 RPS19BP1Q86WX3 136 aaKnown RBP12.92□□□□□ -0.34
SMG6-207ENST00000570756 KLHDC1Q8N7A1 406 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 Q8N7P7 452 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 UBALD1Q8TB05 177 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 C22orf15Q8WYQ4 148 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 IMMP1LQ96LU5 166 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 MBNL3Q9NUK0 354 aaKnown RBP12.92□□□□□ -0.34
SMG6-207ENST00000570756 LAMTOR2Q9Y2Q5 125 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 TBL2Q9Y4P3 447 aaKnown RBP12.92□□□□□ -0.34
SMG6-207ENST00000570756 LY96Q9Y6Y9 160 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 CABIN1Q9Y6J0 2220 aa12.92□□□□□ -0.34
SMG6-207ENST00000570756 FAM166BA8MTA8 275 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 J3QT63 122 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 SIRPB1O00241 398 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 MRPL33O75394 65 aaKnown RBP12.91□□□□□ -0.34
SMG6-207ENST00000570756 S1PR2O95136 353 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 OPRK1P41145 380 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 KLF3P57682 345 aaPredicted RBP12.91□□□□□ -0.34
SMG6-207ENST00000570756 OR10J3Q5JRS4 329 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 WDR73Q6P4I2 378 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 TCTEX1D1Q8N7M0 179 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 ABHD3Q8WU67 409 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 OR2D2Q9H210 308 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 SDK2Q58EX2 2172 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 SAA2-SAA4A0A096LPE2 208 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 STAG3L2P0CL84 134 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 STAG3L3P0CL85 134 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms