RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PLEKHA3Q9HB20 300 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 SCN3BQ9NY72 215 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 MGAT4AQ9UM21 535 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 RBM7Q9Y580 266 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 DNAH7Q8WXX0 4024 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 A0A0B4J203 849 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 A8MZ25 164 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 H3BUA1 57 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 CASQ2O14958 399 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 MPPED1O15442 326 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 CRYZL1O95825 349 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 FCGR3AP08637 254 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 EDN2P20800 178 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 SERPINB10P48595 397 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 OR10A3P58181 314 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 RHOGP84095 191 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 FABP5Q01469 135 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 TATDN3Q17R31 274 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 RTL8BQ17RB0 113 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 C10orf55Q5SWW7 151 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 ZNF343Q6P1L6 599 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 GTSCR1Q86UQ5 136 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 OR4A4PQ8NGN8 299 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 OR10J5Q8NHC4 309 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 ACOT12Q8WYK0 555 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 GINS4Q9BRT9 223 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 NKX1-2Q9UD57 310 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 V9GY05 133 aa6.54□□□□□ -1.36
CTDNEP1-203ENST00000570385 EPPK1P58107 5090 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 IGKV1D-8A0A087WSZ0 117 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 TRBV6-7A0A0A0MS04 114 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 LINC00473A8K010 186 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 RGS10O43665 173 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 ARL6IP5O75915 188 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 HLA-AP01891 365 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 IFNA6P05013 189 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 OR9G9P0C7N8 305 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 AADACP22760 399 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 AQP4P55087 323 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 CD81P60033 236 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 CBX3Q13185 183 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 TPBGQ13641 420 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 PRSS8Q16651 343 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 VMA21Q3ZAQ7 101 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 TMEM177Q53S58 311 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 OR2B11Q5JQS5 317 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 LCN12Q6JVE5 192 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 C19orf35Q6ZS72 473 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 ADAD2Q8NCV1 583 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 SRSF12Q8WXF0 261 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 SNAPC3Q92966 411 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 USMG5Q96IX5 58 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 TMEM68Q96MH6 324 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 THAP7Q9BT49 309 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 DCUN1D5Q9BTE7 237 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 CABLES2Q9BTV7 478 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 WFDC10AQ9H1F0 79 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 VCXQ9H320 206 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 AKIP1Q9NQ31 210 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 ELF5Q9UKW6 265 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 RAB22AQ9UL26 194 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 TPRKBQ9Y3C4 175 aa6.53□□□□□ -1.36
CTDNEP1-203ENST00000570385 SHISA3A0PJX4 238 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 SMIM30A4D0T7 59 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 PPP5D1E7EU14 171 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 BMPR1BO00238 502 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 OR2J3O76001 311 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 IGHV3-23P01764 117 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 CD7P09564 240 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 DUTP33316 252 aaKnown RBP6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 TALDO1P37837 337 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 UBE2KP61086 200 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 ZNF45Q02386 682 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 ATP5G2Q06055 141 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 MLLT11Q13015 90 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 ARFRP1Q13795 201 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 EXOSC2Q13868 293 aaKnown RBP6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 VKORC1L1Q8N0U8 176 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 Q8N402 240 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 DEFB125Q8N687 156 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 OR10R2Q8NGX6 335 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 NRG4Q8WWG1 115 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 MGLLQ99685 303 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 DUSP21Q9H596 190 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 ZNF430Q9H8G1 570 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 CEPT1Q9Y6K0 416 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 S4R3C0 116 aa6.52□□□□□ -1.37
CTDNEP1-203ENST00000570385 HMX3A6NHT5 357 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 RAB27BO00194 218 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 MFNGO00587 321 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 FCGR3BO75015 233 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 TUSC2O75896 110 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 ACTL6BO94805 426 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 TPPPO94811 219 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 OR2A4O95047 310 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 OR2C1O95371 312 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 SAA1P0DJI8 122 aaPredicted RBP6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 RRASP10301 218 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms