RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 CBX3Q13185 183 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 C5orf64Q2M2E5 130 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 NSUN5P1Q3KNT7 163 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 TMEM95Q3KNT9 176 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 LCE4AQ5TA78 99 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF660Q6AZW8 331 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-219ENST00000569136 HOGA1Q86XE5 327 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 PDPNQ86YL7 162 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 STPG2Q8N412 459 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 SAMD12Q8N8I0 201 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 FAM110DQ8TAY7 271 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-219ENST00000569136 NUDCD2Q8WVJ2 157 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 AP3S1Q92572 193 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 SLC25A38Q96DW6 304 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 RITA1Q96K30 269 aa7.24□□□□□ -1.25
CAPN3-219ENST00000569136 PARP12Q9H0J9 701 aaKnown RBP7.24□□□□□ -1.25
CAPN3-219ENST00000569136 ELF5Q9UKW6 265 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-219ENST00000569136 NOTCH1P46531 2555 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 M0R1X1 148 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 RRHO14718 337 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 SSX5O60225 188 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 PROP1O75360 226 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 NDUFA3O95167 84 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 ELANEP08246 267 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 SMIM18P0DKX4 95 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF182P17025 639 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-219ENST00000569136 RPL5P46777 297 aaKnown RBP7.23□□□□□ -1.25
CAPN3-219ENST00000569136 ALDH3B2P48448 385 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 THBS3P49746 956 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 ARPC4P59998 168 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 NCS1P62166 190 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 FOXE3Q13461 319 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 CTF1Q16619 201 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 RTL8BQ17RB0 113 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 C19orf54Q5BKX5 351 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 TMEM69Q5SWH9 247 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 GPR107Q5VW38 600 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 FAM131AQ6UXB0 335 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF562Q6V9R5 426 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF383Q8NA42 475 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 WFDC9Q8NEX5 89 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 BEST4Q8NFU0 473 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 C15orf40Q8WUR7 153 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 MAFIPQ8WZ33 124 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 R3HDM4Q96D70 268 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 BCL7BQ9BQE9 202 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 OR2D2Q9H210 308 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 OR51J1Q9H342 316 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 NECAP2Q9NVZ3 263 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 SDHAF2Q9NX18 166 aa7.23□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF107Q9UII5 783 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-219ENST00000569136 VWFP04275 2813 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 IGKV1D-8A0A087WSZ0 117 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 LINC01548A6NM66 108 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 TUSC2O75896 110 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 GABARAPO95166 117 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 SPDEFO95238 335 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 VDAC1P21796 283 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 PRSS3P35030 304 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 TGFBR1P36897 503 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 PLGLAQ15195 96 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 MSMO1Q15800 293 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 TCTEX1D4Q5JR98 221 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 CXorf66Q5JRM2 361 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF329Q86UD4 541 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 ZNF645Q8N7E2 425 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 RNF152Q8N8N0 203 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 DRAXINQ8NBI3 349 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-219ENST00000569136 ZBTB34Q8NCN2 500 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 GIMAP1Q8WWP7 306 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 BORCS5Q969J3 196 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 NOL4LQ96MY1 436 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-219ENST00000569136 HSD17B10Q99714 261 aaKnown RBP7.22□□□□□ -1.25
CAPN3-219ENST00000569136 SCPEP1Q9HB40 452 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 SLC35D1Q9NTN3 355 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 COMMD3Q9UBI1 195 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 PRELID3BQ9Y3B1 194 aa7.22□□□□□ -1.25
CAPN3-219ENST00000569136 SULT1C2O00338 296 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 IGHG4P01861 327 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 NFYAP23511 347 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-219ENST00000569136 CD40LGP29965 261 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 FCGR2CP31995 323 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 TMBIM6P55061 237 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 TAS2R46P59540 309 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 CX3CL1P78423 397 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 PSG5Q15238 335 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 TMEM65Q6PI78 240 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 DHRS11Q6UWP2 260 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 GLDNQ6ZMI3 551 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-219ENST00000569136 TCTEX1D1Q8N7M0 179 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 OR5AP2Q8NGF4 316 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 RAB2BQ8WUD1 216 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 TMEM68Q96MH6 324 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 WWC2-AS2Q96NR7 200 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 AIFM2Q9BRQ8 373 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 IFT46Q9NQC8 304 aa7.21□□□□□ -1.26
CAPN3-219ENST00000569136 IGHV7-81A0A0B4J1V7 117 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 IGKV1-16P04430 117 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 PF4V1P10720 104 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 CNTFRP26992 372 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms