RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 TAF15Q92804 592 aaKnown RBP eCLIP13.34□□□□□ -0.27
COMMD4-224ENST00000568877 C7orf50Q9BRJ6 194 aaKnown RBP13.34□□□□□ -0.27
COMMD4-224ENST00000568877 SLC2A9Q9NRM0 540 aa13.34□□□□□ -0.27
COMMD4-224ENST00000568877 NBR2O15453 112 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 PLA2G10O15496 165 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 PEX14O75381 377 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 CRYZL1O95825 349 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 AMY1AP04745 511 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 CTSDP07339 412 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-224ENST00000568877 HKR1P10072 659 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 CNTFRP26992 372 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 KIR2DS2P43631 304 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 PIGPP57054 158 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 BRWD1-AS2P59051 145 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 RND3P61587 244 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 BLCAPP62952 87 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 RELBQ01201 579 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 TMEM177Q53S58 311 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 C11orf88Q6PI97 169 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 Q6ZSV7 163 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 SPAG16Q8N0X2 631 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 C5orf56Q8N8D9 126 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 Q8N9W7 124 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 NPBQ8NG41 125 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 OR4S2Q8NH73 311 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 TMEM158Q8WZ71 300 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 SCGB3A2Q96PL1 93 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 TSNAXQ99598 290 aaKnown RBP13.33□□□□□ -0.28
COMMD4-224ENST00000568877 RANBP3Q9H6Z4 567 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-224ENST00000568877 GPR132Q9UNW8 380 aa13.33□□□□□ -0.28
COMMD4-224ENST00000568877 SHOXO15266 292 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 UPK1BO75841 260 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 TSPAN9O75954 239 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 NDUFA7O95182 113 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 LGALS7P47929 136 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 TBC1D26Q86UD7 250 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 POC5Q8NA72 575 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 HARBI1Q96MB7 349 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 RTBDNQ9BSG5 229 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-224ENST00000568877 PRSS22Q9GZN4 317 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 C5orf66Q9H5L9 145 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 KIAA1456Q9P272 454 aa13.32□□□□□ -0.28
COMMD4-224ENST00000568877 C14orf166Q9Y224 244 aaKnown RBP13.32□□□□□ -0.28
COMMD4-224ENST00000568877 MPPED1O15442 326 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 RBFOX2O43251 390 aaKnown RBP eCLIP13.31□□□□□ -0.28
COMMD4-224ENST00000568877 RAMP3O60896 148 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 NDUFA3O95167 84 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 F2RP25116 425 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 RAG2P55895 527 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 PSG5Q15238 335 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 FAM71E2Q8N5Q1 922 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 TCTEX1D1Q8N7M0 179 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 CCDC71LQ8N9Z2 235 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 OSR1Q8TAX0 266 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-224ENST00000568877 CD300LFQ8TDQ1 290 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 RASL11BQ9BPW5 248 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 SLC25A21Q9BQT8 299 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-224ENST00000568877 C19orf24Q9BVV8 132 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 LIN7CQ9NUP9 197 aaKnown RBP13.31□□□□□ -0.28
COMMD4-224ENST00000568877 COPZ2Q9P299 210 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 VSIG4Q9Y279 399 aa13.31□□□□□ -0.28
COMMD4-224ENST00000568877 SH2D7A6NKC9 451 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-224ENST00000568877 RRHO14718 337 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 LYRM1O43325 122 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 SPDEFO95238 335 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 IGLV2-23P01705 113 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 BTCP35070 178 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 CCR6P51684 374 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 C5orf64Q2M2E5 130 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 Q6ZS46 218 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 OR4F5Q8NH21 305 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 FBXL15Q9H469 300 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 C16orf95Q9H693 158 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 ZNF702PQ9H963 129 aa13.3□□□□□ -0.28
COMMD4-224ENST00000568877 FBN1P35555 2871 aaKnown RBP13.3□□□□□ -0.28
COMMD4-224ENST00000568877 TMEM89A2RUT3 159 aa13.29□□□□□ -0.28
COMMD4-224ENST00000568877 SRRM4A7MD48 611 aaKnown RBP13.29□□□□□ -0.28
COMMD4-224ENST00000568877 HPRT1P00492 218 aa13.29□□□□□ -0.28
COMMD4-224ENST00000568877 VSIG10L2P0DP72 767 aa13.29□□□□□ -0.28
COMMD4-224ENST00000568877 IFITM3Q01628 133 aa13.29□□□□□ -0.28
COMMD4-224ENST00000568877 RBMS2Q15434 407 aaKnown RBP13.29□□□□□ -0.28
COMMD4-224ENST00000568877 Q8N2B8 174 aa13.29□□□□□ -0.28
COMMD4-224ENST00000568877 TSC22D3Q99576 134 aa13.29□□□□□ -0.28
COMMD4-224ENST00000568877 FAM212BQ9NTI7 297 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-224ENST00000568877 METTL1Q9UBP6 276 aaKnown RBP13.29□□□□□ -0.28
COMMD4-224ENST00000568877 TBC1D24Q9ULP9 559 aa13.29□□□□□ -0.28
COMMD4-224ENST00000568877 C3orf85A0A1B0GTC6 90 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 SLC25A17O43808 307 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 HRASP01112 189 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 UBE2KP61086 200 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 FOXL1Q12952 345 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 ASAH1Q13510 395 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 PLGLAQ15195 96 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 VMA21Q3ZAQ7 101 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 ZNF585BQ52M93 769 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 C9orf152Q5JTZ5 239 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 LIN54Q6MZP7 749 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 ADAD2Q8NCV1 583 aaKnown RBP13.28□□□□□ -0.28
COMMD4-224ENST00000568877 OR2T6Q8NHC8 308 aa13.28□□□□□ -0.28
COMMD4-224ENST00000568877 LINC01006Q8NI28 216 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms