RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 Q3ZCU0 254 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 DPPA3Q6W0C5 159 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 LURAP1Q96LR2 239 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 B4GALT7Q9UBV7 327 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 SLC31A2O15432 143 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 MEOX1P50221 254 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 NUBP1P53384 320 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 TMEM256Q8N2U0 113 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 TMEM45BQ96B21 275 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 RIMS4Q9H426 269 aaPredicted RBP14.35□□□□□ -0.11
VAC14-210ENST00000568548 CDH20Q9HBT6 801 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 LRP5LA4QPB2 252 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 LINC00473A8K010 186 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 C1QTNF9P0C862 333 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 SERF2P84101 59 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 ZNF114Q8NC26 417 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 OR2T10Q8NGZ9 312 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 LEAP2Q969E1 77 aa14.35□□□□□ -0.11
VAC14-210ENST00000568548 ZNF705FA8MVS1 300 aaPredicted RBP14.34□□□□□ -0.11
VAC14-210ENST00000568548 C21orf140B9A014 251 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 C11orf94C9JXX5 98 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.34□□□□□ -0.11
VAC14-210ENST00000568548 SPINK4O60575 86 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 NDUFB4O95168 129 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 HAND1O96004 215 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 HBZP02008 142 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 ZNF705DP0CH99 300 aaPredicted RBP14.34□□□□□ -0.11
VAC14-210ENST00000568548 ZNF705BP0CI00 300 aaPredicted RBP14.34□□□□□ -0.11
VAC14-210ENST00000568548 PSG7Q13046 419 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 JOSD1Q15040 202 aaPredicted RBP14.34□□□□□ -0.11
VAC14-210ENST00000568548 UTF1Q5T230 341 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 CYP2G1PQ6ZSU1 146 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 OR10P1Q8NGE3 313 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 DTD1Q8TEA8 209 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 PPP1CBP62140 327 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 CNEP1R1Q8N9A8 125 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 MPC1Q9Y5U8 109 aa14.34□□□□□ -0.11
VAC14-210ENST00000568548 OR5B21A6NL26 309 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 DCAF10Q5QP82 559 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 ASPHD1Q5U4P2 390 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 LSM10Q969L4 123 aaKnown RBP14.33□□□□□ -0.12
VAC14-210ENST00000568548 SVEP1Q4LDE5 3571 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 SH2D1BO14796 132 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 NUPR1O60356 82 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 RAC2P15153 192 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 RNPS1Q15287 305 aaKnown RBP14.33□□□□□ -0.12
VAC14-210ENST00000568548 PINX1Q96BK5 328 aaKnown RBP14.33□□□□□ -0.12
VAC14-210ENST00000568548 GALMQ96C23 342 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 IMMP2LQ96T52 175 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 PSMG3Q9BT73 122 aaPredicted RBP14.33□□□□□ -0.12
VAC14-210ENST00000568548 RTL8AQ9BWD3 113 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 RELNP78509 3460 aa14.33□□□□□ -0.12
VAC14-210ENST00000568548 QTRT1Q9BXR0 403 aaKnown RBP14.32□□□□□ -0.12
VAC14-210ENST00000568548 KCNIP1Q9NZI2 227 aa14.32□□□□□ -0.12
VAC14-210ENST00000568548 INTS1Q8N201 2190 aaKnown RBP14.32□□□□□ -0.12
VAC14-210ENST00000568548 HRASP01112 189 aa14.32□□□□□ -0.12
VAC14-210ENST00000568548 SLC25A6P12236 298 aa14.32□□□□□ -0.12
VAC14-210ENST00000568548 BATFQ16520 125 aa14.32□□□□□ -0.12
VAC14-210ENST00000568548 H2BFWTQ7Z2G1 175 aa14.32□□□□□ -0.12
VAC14-210ENST00000568548 LINC00470Q9BZP3 86 aa14.32□□□□□ -0.12
VAC14-210ENST00000568548 RYDENQ9NUL5 291 aaKnown RBP14.32□□□□□ -0.12
VAC14-210ENST00000568548 LRRC30A6NM36 301 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 A8MWP6 167 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 TMEM14EPQ6UXP3 125 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 SSMEM1Q8WWF3 244 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 NINJ1Q92982 152 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 P2RX4Q99571 388 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 NPCDR1Q9BY65 106 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 ACTR3CQ9C0K3 210 aaPredicted RBP14.31□□□□□ -0.12
VAC14-210ENST00000568548 CTDSP1Q9GZU7 261 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 CTXND1A0A1B0GTU2 59 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 SS18L1O75177 396 aaPredicted RBP14.31□□□□□ -0.12
VAC14-210ENST00000568548 PAX5Q02548 391 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 TRIP6Q15654 476 aaKnown RBP14.31□□□□□ -0.12
VAC14-210ENST00000568548 OR13A1Q8NGR1 328 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 TCAPO15273 167 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 RPL29P47914 159 aaKnown RBP14.31□□□□□ -0.12
VAC14-210ENST00000568548 SRSF7Q16629 238 aaKnown RBP eCLIP14.31□□□□□ -0.12
VAC14-210ENST00000568548 BCL2L2Q92843 193 aaPredicted RBP14.31□□□□□ -0.12
VAC14-210ENST00000568548 TMEM242Q9NWH2 141 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 SPRR3Q9UBC9 169 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 TRAPPC1Q9Y5R8 145 aa14.31□□□□□ -0.12
VAC14-210ENST00000568548 TRAV3A0A0B4J244 114 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 SMPD2O60906 423 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 FCGR3BO75015 233 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 FRMD6-AS1P0C7T7 363 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 COX5AP20674 150 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 TAS2R60P59551 318 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 SLC10A1Q14973 349 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 FBXW9Q5XUX1 488 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 TEX38Q6PEX7 206 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 ABHD12Q8N2K0 398 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 NEIL1Q96FI4 390 aaPredicted RBP14.3□□□□□ -0.12
VAC14-210ENST00000568548 IL3RAP26951 378 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 CDC34P49427 236 aaPredicted RBP14.3□□□□□ -0.12
VAC14-210ENST00000568548 UBE2NP61088 152 aaKnown RBP14.3□□□□□ -0.12
VAC14-210ENST00000568548 TBC1D28Q2M2D7 210 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 COQ2Q96H96 371 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 HINT2Q9BX68 163 aa14.3□□□□□ -0.12
VAC14-210ENST00000568548 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms