RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 GLIPR1L1Q6UWM5 242 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 RBPMS2Q6ZRY4 209 aaKnown RBP8.62□□□□□ -1.03
CLK3-222ENST00000568232 PDPNQ86YL7 162 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 GPHB5Q86YW7 130 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 ACBD7Q8N6N7 88 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 OR14A2Q96R54 314 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 SULT4A1Q9BR01 284 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 SELENOIQ9C0D9 397 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 C11orf54Q9H0W9 315 aaPredicted RBP8.62□□□□□ -1.03
CLK3-222ENST00000568232 S4R3C0 116 aa8.62□□□□□ -1.03
CLK3-222ENST00000568232 FAM90A7PA6NKC0 464 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 SRRM4A7MD48 611 aaKnown RBP8.61□□□□□ -1.03
CLK3-222ENST00000568232 MPPED1O15442 326 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 BDKRB2P30411 391 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 PPP3R1P63098 170 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 GPR176Q14439 515 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 ODF3L2Q3SX64 289 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 C19orf35Q6ZS72 473 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 SLC38A6Q8IZM9 456 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 OR11H2Q8NH07 326 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 OR5B3Q8NH48 314 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 MUL1Q969V5 352 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 C11orf68Q9H3H3 251 aaKnown RBP8.61□□□□□ -1.03
CLK3-222ENST00000568232 ABRACLQ9P1F3 81 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 OR1A1Q9P1Q5 309 aa8.61□□□□□ -1.03
CLK3-222ENST00000568232 EXOSC1Q9Y3B2 195 aaKnown RBP8.61□□□□□ -1.03
CLK3-222ENST00000568232 IGHV4-4A0A075B6R2 117 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 SAC3D1A6NKF1 404 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 CDK2AP2O75956 126 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 TNFAIP8O95379 198 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 APOA2P02652 100 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 GLAP06280 429 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 MGMTP16455 207 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 ARL3P36405 182 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 CEACAM6P40199 344 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 TNXAQ16473 311 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 ZNF585BQ52M93 769 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 CLEC19AQ6UXS0 136 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 NECAP1Q8NC96 275 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 CIB1Q99828 191 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 KRTAP4-8Q9BYQ9 185 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 SLC35D1Q9NTN3 355 aa8.6□□□□□ -1.03
CLK3-222ENST00000568232 TRAV25A0A0B4J276 109 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 A6NHS1 94 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 A8MWP6 167 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 G3V2T6 193 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 PDCD6O75340 191 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 CRTAPO75718 401 aaPredicted RBP8.59□□□□□ -1.03
CLK3-222ENST00000568232 CD2P06729 351 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 AQP4P55087 323 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 ZNF124Q15973 351 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 FAM106AQ4KMX7 169 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 UNQ9165/PRO28630Q6UXU0 137 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 IDO2Q6ZQW0 420 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 APRG1Q8IVJ8 170 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 Q8N1X5 172 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 SYS1Q8N2H4 156 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 POM121L12Q8N7R1 296 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 GPR148Q8TDV2 347 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 SRSF12Q8WXF0 261 aaKnown RBP8.59□□□□□ -1.03
CLK3-222ENST00000568232 LGALS12Q96DT0 336 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 GALNT14Q96FL9 552 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 Q96M66 194 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 HARBI1Q96MB7 349 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 CCDC140Q96MF4 163 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 FAAP24Q9BTP7 215 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 GABARAPL1Q9H0R8 117 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 AASSQ9UDR5 926 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 OAZ3Q9UMX2 235 aa8.59□□□□□ -1.03
CLK3-222ENST00000568232 EXOGQ9Y2C4 368 aaKnown RBP8.59□□□□□ -1.03
CLK3-222ENST00000568232 C11orf94C9JXX5 98 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 M0R1X1 148 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 ITGB1BP1O14713 200 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 C8orf88P0DMB2 117 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 IGFBP3P17936 291 aaPredicted RBP8.58□□□□□ -1.04
CLK3-222ENST00000568232 AWAT2Q6E213 333 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 XAF1Q6GPH4 301 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 OR13C5Q8NGS8 318 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 SETD6Q8TBK2 473 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 ACOT12Q8WYK0 555 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 SPAG8Q99932 426 aaPredicted RBP8.58□□□□□ -1.04
CLK3-222ENST00000568232 YTHDF1Q9BYJ9 559 aaKnown RBP8.58□□□□□ -1.04
CLK3-222ENST00000568232 CSTL1Q9H114 145 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 SCRT2Q9NQ03 307 aa8.58□□□□□ -1.04
CLK3-222ENST00000568232 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 TRAV8-7A0A075B6U6 113 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 C16orf90A8MZG2 172 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 SHOXO15266 292 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 CAPGP40121 348 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 GBX2P52951 348 aaPredicted RBP8.57□□□□□ -1.04
CLK3-222ENST00000568232 TAGLNQ01995 201 aaKnown RBP8.57□□□□□ -1.04
CLK3-222ENST00000568232 MED22Q15528 200 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 PRSS8Q16651 343 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 FAM209BQ5JX69 171 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 C10orf55Q5SWW7 151 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 C6orf201Q7Z4U5 140 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 TTC9CQ8N5M4 171 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 JAGN1Q8N5M9 183 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 OR4A5Q8NH83 315 aa8.57□□□□□ -1.04
CLK3-222ENST00000568232 CD300LFQ8TDQ1 290 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms