RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 S1PR3Q99500 378 aa6.23□□□□□ -1.41
SMG1-214ENST00000568038 MRPL20Q9BYC9 149 aaKnown RBP6.23□□□□□ -1.41
SMG1-214ENST00000568038 SLC2A8Q9NY64 477 aa6.23□□□□□ -1.41
SMG1-214ENST00000568038 TACC2O95359 2948 aa6.23□□□□□ -1.41
SMG1-214ENST00000568038 ACANP16112 2415 aa6.23□□□□□ -1.41
SMG1-214ENST00000568038 ITPR3Q14573 2671 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 IGHV3-72A0A0B4J1Y9 119 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 IGHV1-3A0A0C4DH29 117 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 FAM240BA0A1B0GVZ2 78 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 GPR31O00270 319 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 SLC22A5O76082 557 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 LY86O95711 162 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 IGLV2-14P01704 120 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 SRD5A1P18405 259 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 ZNF137PP52743 207 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 RBMS2Q15434 407 aaKnown RBP6.22□□□□□ -1.41
SMG1-214ENST00000568038 DEFB112Q30KQ8 113 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 ABCA11PQ4W5N1 156 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 ZNF833PQ6ZTB9 187 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 SLC38A6Q8IZM9 456 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.22□□□□□ -1.41
SMG1-214ENST00000568038 OR51H1Q8NH63 302 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 ZFAND1Q8TCF1 268 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 FAM216AQ8WUB2 273 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 RTN4IP1Q8WWV3 396 aaPredicted RBP6.22□□□□□ -1.41
SMG1-214ENST00000568038 SCGB3A2Q96PL1 93 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 ZNF251Q9BRH9 671 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 DPAGT1Q9H3H5 408 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 GHITMQ9H3K2 345 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 PALMDQ9NP74 551 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 GPR132Q9UNW8 380 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 FLVCR2Q9UPI3 526 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 GAB2Q9UQC2 676 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 C14orf166Q9Y224 244 aaKnown RBP6.22□□□□□ -1.41
SMG1-214ENST00000568038 VSIG4Q9Y279 399 aa6.22□□□□□ -1.41
SMG1-214ENST00000568038 CSMD1Q96PZ7 3565 aa6.21□□□□□ -1.41
SMG1-214ENST00000568038 A0A1W2PPI3 338 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 OOSP1A8MZH6 123 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 TIMM23O14925 209 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 ARPC1BO15143 372 aaKnown RBP6.21□□□□□ -1.42
SMG1-214ENST00000568038 PGLYRP1O75594 196 aaPredicted RBP6.21□□□□□ -1.42
SMG1-214ENST00000568038 NDUFB6O95139 128 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 TCRBP04435 133 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 RLN1P04808 185 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 CTSDP07339 412 aaPredicted RBP6.21□□□□□ -1.42
SMG1-214ENST00000568038 FBP1P09467 338 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 CT45A6P0DMU7 189 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 CT45A5P0DMU8 189 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 CT45A7P0DMV0 189 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 AKR1C4P17516 323 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 CD24P25063 80 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 S100GP29377 79 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 SLC6A1P30531 599 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 DUTP33316 252 aaKnown RBP6.21□□□□□ -1.42
SMG1-214ENST00000568038 RAB13P51153 203 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 PIGPP57054 158 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 RPL30P62888 115 aaKnown RBP6.21□□□□□ -1.42
SMG1-214ENST00000568038 ZNF816Q0VGE8 651 aaPredicted RBP6.21□□□□□ -1.42
SMG1-214ENST00000568038 SURF2Q15527 256 aaPredicted RBP6.21□□□□□ -1.42
SMG1-214ENST00000568038 MSMO1Q15800 293 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 OR2B11Q5JQS5 317 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 CCDC144NLQ6NUI1 221 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 FAM71F2Q6NXP2 309 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 NRARPQ7Z6K4 114 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 TMED4Q7Z7H5 227 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 CMTM1Q8IZ96 169 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 OR8H3Q8N146 312 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 ZNF383Q8NA42 475 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 ZBTB34Q8NCN2 500 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 ADAD2Q8NCV1 583 aaKnown RBP6.21□□□□□ -1.42
SMG1-214ENST00000568038 ENKURQ8TC29 256 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 TCTEX1D2Q8WW35 142 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 AKR1E2Q96JD6 320 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 SSX3Q99909 188 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 NABP2Q9BQ15 211 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 SLC25A21Q9BQT8 299 aaPredicted RBP6.21□□□□□ -1.42
SMG1-214ENST00000568038 RTBDNQ9BSG5 229 aaPredicted RBP6.21□□□□□ -1.42
SMG1-214ENST00000568038 MLST8Q9BVC4 326 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 COPZ2Q9P299 210 aa6.21□□□□□ -1.42
SMG1-214ENST00000568038 TRAV6A0A075B6T7 132 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 TEX13DA0A0J9YY54 714 aaPredicted RBP6.2□□□□□ -1.42
SMG1-214ENST00000568038 LINC00473A8K010 186 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 H0YJW9 148 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 H7C2Y5 167 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 MPPED1O15442 326 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 TXNL1O43396 289 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 SPNP16150 400 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 BRS3P32247 399 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 THBS3P49746 956 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 ARHGDIBP52566 201 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 RAB25P57735 213 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 CATR1Q13166 79 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 EIF4EBP1Q13541 118 aaPredicted RBP6.2□□□□□ -1.42
SMG1-214ENST00000568038 HNF4GQ14541 408 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 ZNF66Q6ZN08 573 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 C9orf139Q6ZV77 190 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 KCTD9Q7L273 389 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 TBC1D26Q86UD7 250 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 CENPSQ8N2Z9 138 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms