RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 RNF5Q99942 180 aa14.3□□□□□ -0.12
COMMD4-222ENST00000568034 C19orf24Q9BVV8 132 aa14.3□□□□□ -0.12
COMMD4-222ENST00000568034 NPFFR1Q9GZQ6 430 aa14.3□□□□□ -0.12
COMMD4-222ENST00000568034 RANBP3Q9H6Z4 567 aaPredicted RBP14.3□□□□□ -0.12
COMMD4-222ENST00000568034 SLC2A9Q9NRM0 540 aa14.3□□□□□ -0.12
COMMD4-222ENST00000568034 SCP2D1Q9UJQ7 156 aa14.3□□□□□ -0.12
COMMD4-222ENST00000568034 GPR132Q9UNW8 380 aa14.3□□□□□ -0.12
COMMD4-222ENST00000568034 LINC00854A0A1B0GVQ3 168 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 SRRM4A7MD48 611 aaKnown RBP14.29□□□□□ -0.12
COMMD4-222ENST00000568034 M0QZK8 103 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 RAMP3O60896 148 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 FCGR3BO75015 233 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 CRYZL1O95825 349 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 IGLV2-23P01705 113 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 CRYBA1P05813 215 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 CTSDP07339 412 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-222ENST00000568034 VSIG10L2P0DP72 767 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 RRASP10301 218 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 ECI1P42126 302 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 INPP1P49441 399 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 RAG2P55895 527 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 SURF2Q15527 256 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-222ENST00000568034 RTL8BQ17RB0 113 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 CMTM1Q8IZ96 169 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 Q8N2B8 174 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 OR4C13Q8NGP0 309 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 OR51H1Q8NH63 302 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 FLYWCH2Q96CP2 140 aaKnown RBP14.29□□□□□ -0.12
COMMD4-222ENST00000568034 RTBDNQ9BSG5 229 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-222ENST00000568034 C5orf66Q9H5L9 145 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 VSIG4Q9Y279 399 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 PRELID3BQ9Y3B1 194 aa14.29□□□□□ -0.12
COMMD4-222ENST00000568034 TMEM89A2RUT3 159 aa14.28□□□□□ -0.12
COMMD4-222ENST00000568034 NCBP2LA6PVI3 153 aaKnown RBP14.28□□□□□ -0.12
COMMD4-222ENST00000568034 NBR2O15453 112 aa14.28□□□□□ -0.12
COMMD4-222ENST00000568034 RBFOX2O43251 390 aaKnown RBP eCLIP14.28□□□□□ -0.12
COMMD4-222ENST00000568034 PEX14O75381 377 aa14.28□□□□□ -0.12
COMMD4-222ENST00000568034 IFITM3Q01628 133 aa14.28□□□□□ -0.12
COMMD4-222ENST00000568034 CATR1Q13166 79 aa14.28□□□□□ -0.12
COMMD4-222ENST00000568034 ABCA11PQ4W5N1 156 aa14.28□□□□□ -0.12
COMMD4-222ENST00000568034 TBC1D26Q86UD7 250 aa14.28□□□□□ -0.12
COMMD4-222ENST00000568034 SPAG16Q8N0X2 631 aa14.28□□□□□ -0.12
COMMD4-222ENST00000568034 TMEM158Q8WZ71 300 aa14.28□□□□□ -0.12
COMMD4-222ENST00000568034 C7orf50Q9BRJ6 194 aaKnown RBP14.28□□□□□ -0.12
COMMD4-222ENST00000568034 C16orf95Q9H693 158 aa14.28□□□□□ -0.12
COMMD4-222ENST00000568034 NAP1L6A6NFF2 107 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 RRHO14718 337 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 UPK1BO75841 260 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 CRYGBP07316 175 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 F2RP25116 425 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 KIR2DS2P43631 304 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 PIGPP57054 158 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 RPS16P62249 146 aaKnown RBP14.27□□□□□ -0.13
COMMD4-222ENST00000568034 PSG5Q15238 335 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 C5orf64Q2M2E5 130 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 OR4S2Q8NH73 311 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 ZFAND1Q8TCF1 268 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 TMEM230Q96A57 120 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 HARBI1Q96MB7 349 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 LIN7CQ9NUP9 197 aaKnown RBP14.27□□□□□ -0.13
COMMD4-222ENST00000568034 TBC1D24Q9ULP9 559 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 SIGLEC9Q9Y336 463 aa14.27□□□□□ -0.13
COMMD4-222ENST00000568034 RNF212BA8MTL3 300 aa14.26□□□□□ -0.13
COMMD4-222ENST00000568034 SPDEFO95238 335 aa14.26□□□□□ -0.13
COMMD4-222ENST00000568034 LGALS7P47929 136 aa14.26□□□□□ -0.13
COMMD4-222ENST00000568034 CCR6P51684 374 aa14.26□□□□□ -0.13
COMMD4-222ENST00000568034 ZNF585BQ52M93 769 aa14.26□□□□□ -0.13
COMMD4-222ENST00000568034 LINC01006Q8NI28 216 aa14.26□□□□□ -0.13
COMMD4-222ENST00000568034 OSR1Q8TAX0 266 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-222ENST00000568034 TSNAXQ99598 290 aaKnown RBP14.26□□□□□ -0.13
COMMD4-222ENST00000568034 MDFIQ99750 246 aa14.26□□□□□ -0.13
COMMD4-222ENST00000568034 FBXL15Q9H469 300 aa14.26□□□□□ -0.13
COMMD4-222ENST00000568034 TPSG1Q9NRR2 321 aa14.26□□□□□ -0.13
COMMD4-222ENST00000568034 COL6A5A8TX70 2615 aa14.26□□□□□ -0.13
COMMD4-222ENST00000568034 SHOXO15266 292 aa14.25□□□□□ -0.13
COMMD4-222ENST00000568034 MPPED1O15442 326 aa14.25□□□□□ -0.13
COMMD4-222ENST00000568034 LYRM1O43325 122 aa14.25□□□□□ -0.13
COMMD4-222ENST00000568034 MDKP21741 143 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-222ENST00000568034 CBX3Q13185 183 aa14.25□□□□□ -0.13
COMMD4-222ENST00000568034 MRGPRG-AS1Q2M3A8 158 aa14.25□□□□□ -0.13
COMMD4-222ENST00000568034 TMEM95Q3KNT9 176 aa14.25□□□□□ -0.13
COMMD4-222ENST00000568034 OR4F5Q8NH21 305 aa14.25□□□□□ -0.13
COMMD4-222ENST00000568034 HSPB9Q9BQS6 159 aa14.25□□□□□ -0.13
COMMD4-222ENST00000568034 PRSS22Q9GZN4 317 aa14.25□□□□□ -0.13
COMMD4-222ENST00000568034 KIAA1456Q9P272 454 aa14.25□□□□□ -0.13
COMMD4-222ENST00000568034 PLXNB1O43157 2135 aa14.24□□□□□ -0.13
COMMD4-222ENST00000568034 SLC25A17O43808 307 aa14.24□□□□□ -0.13
COMMD4-222ENST00000568034 S1PR2O95136 353 aa14.24□□□□□ -0.13
COMMD4-222ENST00000568034 SAA1P0DJI8 122 aaPredicted RBP14.24□□□□□ -0.13
COMMD4-222ENST00000568034 ADAD2Q8NCV1 583 aaKnown RBP14.24□□□□□ -0.13
COMMD4-222ENST00000568034 SLC25A21Q9BQT8 299 aaPredicted RBP14.24□□□□□ -0.13
COMMD4-222ENST00000568034 SERTAD4Q9NUC0 356 aa14.24□□□□□ -0.13
COMMD4-222ENST00000568034 COPZ2Q9P299 210 aa14.24□□□□□ -0.13
COMMD4-222ENST00000568034 METTL1Q9UBP6 276 aaKnown RBP14.24□□□□□ -0.13
COMMD4-222ENST00000568034 C14orf166Q9Y224 244 aaKnown RBP14.24□□□□□ -0.13
COMMD4-222ENST00000568034 MMP24Q9Y5R2 645 aa14.24□□□□□ -0.13
COMMD4-222ENST00000568034 DNHD1Q96M86 4753 aa14.24□□□□□ -0.13
COMMD4-222ENST00000568034 LINC01548A6NM66 108 aa14.23□□□□□ -0.13
COMMD4-222ENST00000568034 H0Y980 276 aa14.23□□□□□ -0.13
COMMD4-222ENST00000568034 FCN1O00602 326 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms