RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CA2P00918 260 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 LGALS1P09382 135 aaKnown RBP3.71□□□□□ -1.82
CLK3-219ENST00000567805 CTXN2P0C2S0 81 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 RRASP10301 218 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 EGR2P11161 476 aaPredicted RBP3.71□□□□□ -1.82
CLK3-219ENST00000567805 SDC2P34741 201 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 LGALS7P47929 136 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 INSL3P51460 131 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 LUMP51884 338 aaPredicted RBP3.71□□□□□ -1.82
CLK3-219ENST00000567805 LINC00205P59089 165 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 GNB1P62873 340 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 PITPNAQ00169 270 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 CD69Q07108 199 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 FXYD3Q14802 87 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 RTL8BQ17RB0 113 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 CDNFQ49AH0 187 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 KCTD21Q4G0X4 260 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 DEFB121Q5J5C9 76 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 ASPHD1Q5U4P2 390 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 HACD4Q5VWC8 232 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 SFXN4Q6P4A7 337 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 UNQ5815/PRO19632Q6UWF5 114 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 H1FOOQ8IZA3 346 aaPredicted RBP3.71□□□□□ -1.82
CLK3-219ENST00000567805 LFNGQ8NES3 379 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 OR1N2Q8NGR9 330 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 LGALS14Q8TCE9 139 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 MAFIPQ8WZ33 124 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 ARPC1AQ92747 370 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 ADTRPQ96IZ2 230 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 HARBI1Q96MB7 349 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 OR5B12Q96R08 314 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 CLCC1Q96S66 551 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 B9D2Q9BPU9 175 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 FAM103A1Q9BTL3 118 aaKnown RBP3.71□□□□□ -1.82
CLK3-219ENST00000567805 OR51E2Q9H255 320 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 DCSTAMPQ9H295 470 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 SLA2Q9H6Q3 261 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 TPSG1Q9NRR2 321 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 DAPK2Q9UIK4 370 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 SCOCQ9UIL1 159 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 RRP15Q9Y3B9 282 aaKnown RBP3.71□□□□□ -1.82
CLK3-219ENST00000567805 ETV7Q9Y603 341 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 IGKV1D-8A0A087WSZ0 117 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 ELOA3CA0A087WX78 387 aaPredicted RBP3.7□□□□□ -1.82
CLK3-219ENST00000567805 A0A0A6YYH2 397 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 A0A0G2JLM5 398 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 LOC100506127A0A0U1RQW1 187 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 TMEM235A6NFC5 223 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 A6NJ64 397 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 LINC01619G3V211 115 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 H3BUA1 57 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 OVOL1O14753 267 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 ARPC1BO15143 372 aaKnown RBP3.7□□□□□ -1.82
CLK3-219ENST00000567805 TMEM127O75204 238 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 CNIH1O95406 144 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 BRI3O95415 125 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 IGLV2-23P01705 113 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 HLA-DQB1P01920 261 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 TRGV3P03979 118 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 HSPB1P04792 205 aaKnown RBP3.7□□□□□ -1.82
CLK3-219ENST00000567805 CRYGBP07316 175 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 CD36P16671 472 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 DUTP33316 252 aaKnown RBP3.7□□□□□ -1.82
CLK3-219ENST00000567805 ECI1P42126 302 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 TPPP2P59282 170 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 GNG2P59768 71 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 UBE2KP61086 200 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 SSBP2P81877 361 aaPredicted RBP3.7□□□□□ -1.82
CLK3-219ENST00000567805 MXD1Q05195 221 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 PJVKQ0ZLH3 352 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 NEDD8Q15843 81 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 VMA21Q3ZAQ7 101 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 TIMM50Q3ZCQ8 353 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 ZNF260Q3ZCT1 412 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 TMEM177Q53S58 311 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 CNIH2Q6PI25 160 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 ZNF429Q86V71 674 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 ZNF645Q8N7E2 425 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 TEX45Q8NA69 505 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 BVESQ8NE79 360 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 GRPEL2Q8TAA5 225 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 OSR1Q8TAX0 266 aaPredicted RBP3.7□□□□□ -1.82
CLK3-219ENST00000567805 CASTOR1Q8WTX7 329 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 NUDCD2Q8WVJ2 157 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 DDB2Q92466 427 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 C5orf30Q96GV9 206 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 TMEM68Q96MH6 324 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 MS4A10Q96PG2 267 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 ST6GALNAC5Q9BVH7 336 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 ALX4Q9H161 411 aaPredicted RBP3.7□□□□□ -1.82
CLK3-219ENST00000567805 RHBDL2Q9NX52 303 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 ANXA10Q9UJ72 324 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 ELF5Q9UKW6 265 aaPredicted RBP3.7□□□□□ -1.82
CLK3-219ENST00000567805 ZNF256Q9Y2P7 627 aaPredicted RBP3.7□□□□□ -1.82
CLK3-219ENST00000567805 OR2W1Q9Y3N9 320 aa3.7□□□□□ -1.82
CLK3-219ENST00000567805 HUWE1Q7Z6Z7 4374 aaKnown RBP3.69□□□□□ -1.82
CLK3-219ENST00000567805 IGHV4OR15-8A0A075B7B6 117 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 A0A087WW49 117 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 C13orf42A0A1B0GVH6 325 aa3.69□□□□□ -1.82
CLK3-219ENST00000567805 SRRM4A7MD48 611 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms