RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 LHFPL6Q9Y693 200 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 GREB1Q4ZG55 1949 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 MEGF8Q7Z7M0 2845 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 CCDC88AQ3V6T2 1871 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 FRAS1Q86XX4 4008 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 EIF4G1Q04637 1599 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 LRP1Q07954 4544 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 TMEM94Q12767 1356 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 ALPK3Q96L96 1907 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 LOC110117498A0A087WWA1 95 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 TRAV38-1A0A0B4J264 116 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 GOLGA6L7A0A1B0GV03 622 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 LINC00854A0A1B0GVQ3 168 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 IRGMA1A4Y4 181 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 C2orf70A6NJV1 201 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 EFCAB9A8MZ26 197 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 CASC3O15234 703 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 CRXO43186 299 aaPredicted RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 SGCEO43556 437 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 MPZL2O60487 215 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 NSA2O95478 260 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 ATP5G1P05496 136 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 GP1BAP07359 652 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 CD7P09564 240 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 ASAH2BP0C7U1 165 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 TRGC1P0CF51 173 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 UBBP0CG47 229 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 LIMS3P0CW19 117 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 LIMS4P0CW20 117 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 FKBP2P26885 142 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 HLA-DMBP28068 263 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 ALDH3A1P30838 453 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 LCN1P31025 176 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 ZNF93P35789 620 aaPredicted RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 NUP62P37198 522 aaPredicted RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 CRATP43155 626 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 GABRA2P47869 451 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 CLDN12P56749 244 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 TPI1P60174 286 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 C1QTNF8P60827 252 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 RAB14P61106 215 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 TBPL1P62380 186 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 SUPT4H1P63272 117 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 SMAGPQ0VAQ4 97 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 RAB31Q13636 194 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 ZNF345Q14585 488 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 ZNF846Q147U1 533 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 C4orf26Q17RF5 130 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 BSXQ3C1V8 233 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 LCN8Q6JVE9 175 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 AHSA2Q719I0 299 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 SPATA24Q86W54 205 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 C10orf67Q8IYJ2 551 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 LRRC34Q8IZ02 419 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 BLIDQ8IZY5 108 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 UMODL1-AS1Q8N2C9 162 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 SLC22A24Q8N4F4 322 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 SPERTQ8NA61 448 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 OR4C6Q8NH72 309 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 FAM45AQ8TCE6 357 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 LGALS14Q8TCE9 139 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 RNASEH2CQ8TDP1 164 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 ZNF418Q8TF45 676 aaPredicted RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 MITD1Q8WV92 249 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 AQP3Q92482 292 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 TESCQ96BS2 214 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 MRAP2Q96G30 205 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 TMEM56Q96MV1 263 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 FAM210AQ96ND0 272 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 AMELYQ99218 206 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 MRPL57Q9BQC6 102 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 EIF5A2Q9GZV4 153 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 GAL3ST2Q9H3Q3 398 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 RPRD1BQ9NQG5 326 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 CISHQ9NSE2 258 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 TMEM216Q9P0N5 145 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 NAT8Q9UHE5 227 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 RBMX2Q9Y388 322 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 DSCAML1Q8TD84 2053 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 ZFC3H1O60293 1989 aaKnown RBP-0.14□□□□□ -2.43
CDH1-211ENST00000567320 NPATQ14207 1427 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 RIMS2Q9UQ26 1411 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 TTC21AQ8NDW8 1320 aa-0.14□□□□□ -2.43
CDH1-211ENST00000567320 DICER1Q9UPY3 1922 aaKnown RBP-0.15□□□□□ -2.43
CDH1-211ENST00000567320 CNTRLQ7Z7A1 2325 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 KIAA0232Q92628 1395 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 KIF15Q9NS87 1388 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 EML5Q05BV3 1969 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 EXPH5Q8NEV8 1989 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 TNCP24821 2201 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 KDM6BO15054 1643 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 A0A087WX48 190 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 TRBV6-8A0A0A6YYG3 113 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 TRAV1-1A0A0B4J248 108 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 TMEM269A0A1B0GVZ9 245 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 OR6C6A6NF89 314 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 C9JCJ5 164 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 H0YC42 278 aa-0.15□□□□□ -2.43
CDH1-211ENST00000567320 SMLR1H3BR10 107 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 224.9 ms