RNA–Protein interactions for RNA: ENST00000567019.1

EPB42-206, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best)

Gene EPB42, Length 1,628 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-206ENST00000567019 DUXBA0A1W2PPF3 345 aa12.53□□□□□ -0.4
EPB42-206ENST00000567019 ATG12O94817 140 aa12.53□□□□□ -0.4
EPB42-206ENST00000567019 HOXB4P17483 251 aaPredicted RBP12.53□□□□□ -0.4
EPB42-206ENST00000567019 NUP62P37198 522 aaPredicted RBP12.53□□□□□ -0.4
EPB42-206ENST00000567019 OR2B11Q5JQS5 317 aa12.53□□□□□ -0.4
EPB42-206ENST00000567019 C1orf229Q6ZS94 237 aaPredicted RBP12.53□□□□□ -0.4
EPB42-206ENST00000567019 ACOT7LQ6ZUV0 252 aa12.53□□□□□ -0.4
EPB42-206ENST00000567019 TGIF2LXQ8IUE1 241 aa12.53□□□□□ -0.4
EPB42-206ENST00000567019 KRTAP1-3Q8IUG1 177 aa12.53□□□□□ -0.4
EPB42-206ENST00000567019 SELENOHQ8IZQ5 122 aaKnown RBP12.53□□□□□ -0.4
EPB42-206ENST00000567019 SCARB1Q8WTV0 552 aa12.53□□□□□ -0.4
EPB42-206ENST00000567019 RBPMSQ93062 196 aaKnown RBP12.53□□□□□ -0.4
EPB42-206ENST00000567019 ST6GALNAC6Q969X2 333 aa12.53□□□□□ -0.4
EPB42-206ENST00000567019 C18orf12Q96KH6 178 aa12.53□□□□□ -0.4
EPB42-206ENST00000567019 PDZD2O15018 2839 aa12.53□□□□□ -0.4
EPB42-206ENST00000567019 TRAV14DV4A0A0A6YYC5 116 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 LEUTXA8MZ59 168 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 CCSO14618 274 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 ADAP1O75689 374 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 HTR1DP28221 377 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 CEACAM3P40198 252 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 LPAR6P43657 344 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 LGALS4P56470 323 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 UBA52P62987 128 aaKnown RBP12.52□□□□□ -0.4
EPB42-206ENST00000567019 TAGLNQ01995 201 aaKnown RBP12.52□□□□□ -0.4
EPB42-206ENST00000567019 KLRD1Q13241 179 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 LYZL2Q7Z4W2 148 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 KCNRGQ8N5I3 272 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 SLC35G3Q8N808 338 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 OR4P4Q8NGL7 312 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 LHFPL5Q8TAF8 219 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 SEC22AQ96IW7 307 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 CITED4Q96RK1 184 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 TBX15Q96SF7 602 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 HIF1ANQ9NWT6 349 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 TNFSF18Q9UNG2 199 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 TMED3Q9Y3Q3 217 aa12.52□□□□□ -0.4
EPB42-206ENST00000567019 RNASEK-C17orf49H0YIS7 233 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 RBFOX2O43251 390 aaKnown RBP eCLIP12.51□□□□□ -0.41
EPB42-206ENST00000567019 TXNL1O43396 289 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 RAMP3O60896 148 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 FCGR3BO75015 233 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 GAPDHP04406 335 aaKnown RBP12.51□□□□□ -0.41
EPB42-206ENST00000567019 CT45A6P0DMU7 189 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 CT45A5P0DMU8 189 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 CT45A7P0DMV0 189 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 EPHA1P21709 976 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 REG1BP48304 166 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 UBE2E1P51965 193 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 LINC00205P59089 165 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 ZNF816Q0VGE8 651 aaPredicted RBP12.51□□□□□ -0.41
EPB42-206ENST00000567019 RTL8BQ17RB0 113 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 ZNF585BQ52M93 769 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 HCP5Q6MZN7 132 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 PDZD9Q8IXQ8 264 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 MAPK1IP1LQ8NDC0 245 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 RNASE11Q8TAA1 199 aaKnown RBP12.51□□□□□ -0.41
EPB42-206ENST00000567019 LHX4Q969G2 390 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 RPEQ96AT9 228 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 DPM3Q9P2X0 92 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 AUP1Q9Y679 476 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 ODF3BA8MYP8 253 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 HPRT1P00492 218 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 APOA2P02652 100 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 RRASP10301 218 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 VDAC1P21796 283 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 GGNBP1Q5YKI7 109 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 ZNF383Q8NA42 475 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 OR4S2Q8NH73 311 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 DDB2Q92466 427 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 C2orf50Q96LR7 162 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 MRPL20Q9BYC9 149 aaKnown RBP12.51□□□□□ -0.41
EPB42-206ENST00000567019 C7orf69Q9H7B7 122 aa12.51□□□□□ -0.41
EPB42-206ENST00000567019 TGFAP01135 160 aa12.5□□□□□ -0.41
EPB42-206ENST00000567019 AKR1C2P52895 323 aa12.5□□□□□ -0.41
EPB42-206ENST00000567019 BRWD1-AS2P59051 145 aa12.5□□□□□ -0.41
EPB42-206ENST00000567019 TMEM249Q2WGJ8 235 aa12.5□□□□□ -0.41
EPB42-206ENST00000567019 LRRC37A5PQ49AS3 106 aa12.5□□□□□ -0.41
EPB42-206ENST00000567019 MINOS1Q5TGZ0 78 aa12.5□□□□□ -0.41
EPB42-206ENST00000567019 WFDC11Q8NEX6 87 aa12.5□□□□□ -0.41
EPB42-206ENST00000567019 RRNAD1Q96FB5 475 aaKnown RBP12.5□□□□□ -0.41
EPB42-206ENST00000567019 PHYHIPLQ96FC7 376 aa12.5□□□□□ -0.41
EPB42-206ENST00000567019 PLEKHA2Q9HB19 425 aa12.5□□□□□ -0.41
EPB42-206ENST00000567019 MINOS1-NBL1R4GNA1 71 aa12.5□□□□□ -0.41
EPB42-206ENST00000567019 CR1P17927 2039 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 LY6LH3BQJ8 138 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 S1PR2O95136 353 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 CFDP00746 253 aaPredicted RBP12.49□□□□□ -0.41
EPB42-206ENST00000567019 MC5RP33032 325 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 DIAPH2-AS1Q14236 149 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 IAH1Q2TAA2 248 aaPredicted RBP12.49□□□□□ -0.41
EPB42-206ENST00000567019 DHRS7BQ6IAN0 325 aaPredicted RBP12.49□□□□□ -0.41
EPB42-206ENST00000567019 LSM10Q969L4 123 aaKnown RBP12.49□□□□□ -0.41
EPB42-206ENST00000567019 SPIN2AQ99865 258 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 SPIN2BQ9BPZ2 258 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 NABP2Q9BQ15 211 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 SLC35D1Q9NTN3 355 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 ZFP57Q9NU63 452 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 MED9Q9NWA0 146 aa12.49□□□□□ -0.41
EPB42-206ENST00000567019 TBL2Q9Y4P3 447 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms