RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 OR2H2O95918 312 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 KRASP01116 189 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 ARR3P36575 388 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 C9orf135Q5VTT2 229 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 TOMM20LQ6UXN7 152 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 UBALD1Q8TB05 177 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 AURKAIP1Q9NWT8 199 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-215ENST00000566843 WDR83OSQ9Y284 106 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 SIRPB1O00241 398 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 TRAPPC6AO75865 159 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 NPSP0C0P6 89 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 DEFA4P12838 97 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 BRS3P32247 399 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 FOXG1P55316 489 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-215ENST00000566843 ERVK11-1P61568 191 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 ZDHHC11Q9H8X9 412 aa13.14□□□□□ -0.31
COMMD4-215ENST00000566843 A6NNC1 897 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 PATE3B3GLJ2 98 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 CFIP05156 583 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 SPINK2P20155 84 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 BRWD1-AS2P59051 145 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 TDRG1Q3Y452 100 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 GMPPAQ96IJ6 420 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-215ENST00000566843 TRBV20OR9-2A0A075B6H5 130 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 S1PR2O95136 353 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 CLDN14O95500 239 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 KITLGP21583 273 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 TNFSF10P50591 281 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 UBE2G2P60604 165 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 ZNF816Q0VGE8 651 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-215ENST00000566843 TMEM183BQ1AE95 376 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 LPAR2Q9HBW0 351 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 DEPPQ9NTK1 212 aa13.13□□□□□ -0.31
COMMD4-215ENST00000566843 GRIFINA4D1Z8 144 aa13.12□□□□□ -0.31
COMMD4-215ENST00000566843 PGPEP1LA6NFU8 196 aa13.12□□□□□ -0.31
COMMD4-215ENST00000566843 SP9P0CG40 484 aa13.12□□□□□ -0.31
COMMD4-215ENST00000566843 TIMP3P35625 211 aa13.12□□□□□ -0.31
COMMD4-215ENST00000566843 MRPS11P82912 194 aaKnown RBP13.12□□□□□ -0.31
COMMD4-215ENST00000566843 CATR1Q13166 79 aa13.12□□□□□ -0.31
COMMD4-215ENST00000566843 Q8IYB0 196 aa13.12□□□□□ -0.31
COMMD4-215ENST00000566843 TCTEX1D1Q8N7M0 179 aa13.12□□□□□ -0.31
COMMD4-215ENST00000566843 OR10G8Q8NGN5 311 aa13.12□□□□□ -0.31
COMMD4-215ENST00000566843 C15orf62A8K5M9 175 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 RPS16P62249 146 aaKnown RBP13.11□□□□□ -0.31
COMMD4-215ENST00000566843 SSPNQ14714 243 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 OR2J1Q9GZK6 312 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 TRAV38-1A0A0B4J264 116 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 PINLYPA6NC86 204 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 C17orf98A8MV24 154 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 IL6RP08887 468 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-215ENST00000566843 CD33P20138 364 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 CA6P23280 308 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 GDF1P27539 372 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 COMPP49747 757 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-215ENST00000566843 Q0VG73 95 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 ZNF146Q15072 292 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 GCSAMLQ5JQS6 135 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 HSPB9Q9BQS6 159 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 OR2D2Q9H210 308 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 IL36BQ9NZH7 164 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 CACNA1EQ15878 2313 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 PI4KAP42356 2102 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 ESPL1Q14674 2120 aa13.11□□□□□ -0.31
COMMD4-215ENST00000566843 SERF1AO75920 110 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 CRISP2P16562 243 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 PLP2Q04941 152 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 ARSJQ5FYB0 599 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-215ENST00000566843 WDR86Q86TI4 376 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 SAP25Q8TEE9 199 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 KCNIP1Q9NZI2 227 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 A0A1W2PPV4 95 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 RAC2P15153 192 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 CD1BP29016 333 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 CDKN1AP38936 164 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 IGFBP7Q16270 282 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 TUSC5Q8IXB3 177 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 OCC1Q8TAD7 63 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 TAAR6Q96RI8 345 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 VAMP8Q9BV40 100 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 RTL8AQ9BWD3 113 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 MRPL18Q9H0U6 180 aaKnown RBP13.1□□□□□ -0.31
COMMD4-215ENST00000566843 FREM1Q5H8C1 2179 aa13.1□□□□□ -0.31
COMMD4-215ENST00000566843 SH2D1BO14796 132 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 MPDU1O75352 247 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 NEURL1O76050 574 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 STAG3L2P0CL84 134 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 STAG3L3P0CL85 134 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 SELEP16581 610 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 CBLN1P23435 193 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 OPRK1P41145 380 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 FOLR3P41439 243 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 Q0VFX4 171 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 COTL1Q14019 142 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 H2BFWTQ7Z2G1 175 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 OR5AU1Q8NGC0 362 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 QTRT1Q9BXR0 403 aaKnown RBP13.09□□□□□ -0.31
COMMD4-215ENST00000566843 PATZ1Q9HBE1 687 aaKnown RBP13.09□□□□□ -0.31
COMMD4-215ENST00000566843 GTF3C1Q12789 2109 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 BMP5P22003 454 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms