RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 NDUFB7P17568 137 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 NUTF2P61970 127 aaKnown RBP18.07■□□□□ 0.48
SPSB3-208ENST00000566339 RPL30P62888 115 aaKnown RBP18.07■□□□□ 0.48
SPSB3-208ENST00000566339 TFF3Q07654 80 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 PDLIM3Q53GG5 364 aaPredicted RBP18.07■□□□□ 0.48
SPSB3-208ENST00000566339 C1orf194Q5T5A4 169 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 TMEM251Q8N6I4 163 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 TRAV39A0A0B4J263 110 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.07■□□□□ 0.48
SPSB3-208ENST00000566339 ZNF705GA8MUZ8 300 aaPredicted RBP18.07■□□□□ 0.48
SPSB3-208ENST00000566339 RAMP3O60896 148 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 SMPD2O60906 423 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 TNFSF15O95150 251 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 OPRK1P41145 380 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 OR3A1P47881 315 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 TMPRSS3P57727 454 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 ERVFC1-1P60608 527 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 UBE2NP61088 152 aaKnown RBP18.07■□□□□ 0.48
SPSB3-208ENST00000566339 RTP5Q14D33 572 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 NEU1Q99519 415 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 SPRY4Q9C004 299 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 LOXL2Q9Y4K0 774 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 TRAPPC1Q9Y5R8 145 aa18.07■□□□□ 0.48
SPSB3-208ENST00000566339 CNOT1A5YKK6 2376 aaKnown RBP18.06■□□□□ 0.48
SPSB3-208ENST00000566339 KIR2DL5BA0A0G2JN68 375 aa18.06■□□□□ 0.48
SPSB3-208ENST00000566339 KIR2DL5BA0A0G2JPC4 375 aa18.06■□□□□ 0.48
SPSB3-208ENST00000566339 IFNL4K9M1U5 179 aa18.06■□□□□ 0.48
SPSB3-208ENST00000566339 NPPCP23582 126 aa18.06■□□□□ 0.48
SPSB3-208ENST00000566339 OR10J1P30954 320 aa18.06■□□□□ 0.48
SPSB3-208ENST00000566339 TIPARPQ7Z3E1 657 aaKnown RBP18.06■□□□□ 0.48
SPSB3-208ENST00000566339 KIR2DL5AQ8N109 375 aa18.06■□□□□ 0.48
SPSB3-208ENST00000566339 Q8N7P7 452 aa18.06■□□□□ 0.48
SPSB3-208ENST00000566339 OR1L1Q8NH94 360 aa18.06■□□□□ 0.48
SPSB3-208ENST00000566339 FKBP11Q9NYL4 201 aa18.06■□□□□ 0.48
SPSB3-208ENST00000566339 LY96Q9Y6Y9 160 aa18.06■□□□□ 0.48
SPSB3-208ENST00000566339 LNP1A1A4G5 178 aa18.05■□□□□ 0.48
SPSB3-208ENST00000566339 HBZP02008 142 aa18.05■□□□□ 0.48
SPSB3-208ENST00000566339 CELA3AP09093 270 aa18.05■□□□□ 0.48
SPSB3-208ENST00000566339 CD1BP29016 333 aa18.05■□□□□ 0.48
SPSB3-208ENST00000566339 MAGEA5P43359 124 aa18.05■□□□□ 0.48
SPSB3-208ENST00000566339 GNB1P62873 340 aa18.05■□□□□ 0.48
SPSB3-208ENST00000566339 ZNF816Q0VGE8 651 aaPredicted RBP18.05■□□□□ 0.48
SPSB3-208ENST00000566339 C5orf30Q96GV9 206 aa18.05■□□□□ 0.48
SPSB3-208ENST00000566339 KLF13Q9Y2Y9 288 aaPredicted RBP18.05■□□□□ 0.48
SPSB3-208ENST00000566339 SPEGQ15772 3267 aa18.05■□□□□ 0.48
SPSB3-208ENST00000566339 C15orf62A8K5M9 175 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 C17orf98A8MV24 154 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 M0QZK8 103 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 ADH4P08319 380 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 ESDP10768 282 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 SOX8P57073 446 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 SELENOTP62341 195 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 PAFAH1B2P68402 229 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 HTD2P86397 168 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 FAM78BQ5VT40 261 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 GATAD1Q8WUU5 269 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 MDFIC2A0A1B0GVS7 189 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 A0A1W2PPV4 95 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 C21orf140B9A014 251 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 CDIPTO14735 213 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 BRWD1-AS2P59051 145 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 USF2Q15853 346 aaPredicted RBP18.04■□□□□ 0.48
SPSB3-208ENST00000566339 ELOVL5Q9NYP7 299 aa18.04■□□□□ 0.48
SPSB3-208ENST00000566339 A0A0U1RQK1 487 aa18.03■□□□□ 0.48
SPSB3-208ENST00000566339 ZNF320A2RRD8 509 aa18.03■□□□□ 0.48
SPSB3-208ENST00000566339 HMGB3O15347 200 aaKnown RBP18.03■□□□□ 0.48
SPSB3-208ENST00000566339 RBFOX2O43251 390 aaKnown RBP eCLIP18.03■□□□□ 0.48
SPSB3-208ENST00000566339 CXorf1O96002 111 aa18.03■□□□□ 0.48
SPSB3-208ENST00000566339 SELLP14151 372 aa18.03■□□□□ 0.48
SPSB3-208ENST00000566339 PMP22Q01453 160 aa18.03■□□□□ 0.48
SPSB3-208ENST00000566339 TRIP6Q15654 476 aaKnown RBP18.03■□□□□ 0.48
SPSB3-208ENST00000566339 ZNF124Q15973 351 aa18.03■□□□□ 0.48
SPSB3-208ENST00000566339 SFRP2Q96HF1 295 aa18.03■□□□□ 0.48
SPSB3-208ENST00000566339 ARL2-SNX15V9GYD0 113 aa18.03■□□□□ 0.48
SPSB3-208ENST00000566339 CHD3Q12873 2000 aaKnown RBP18.02■□□□□ 0.48
SPSB3-208ENST00000566339 M0R143 59 aa18.02■□□□□ 0.48
SPSB3-208ENST00000566339 TCAPO15273 167 aa18.02■□□□□ 0.48
SPSB3-208ENST00000566339 STAG3L2P0CL84 134 aa18.02■□□□□ 0.48
SPSB3-208ENST00000566339 STAG3L3P0CL85 134 aa18.02■□□□□ 0.48
SPSB3-208ENST00000566339 TGFBR3Q03167 851 aa18.02■□□□□ 0.48
SPSB3-208ENST00000566339 NCOR2Q9Y618 2525 aa18.02■□□□□ 0.48
SPSB3-208ENST00000566339 FAM166BA8MTA8 275 aa18.02■□□□□ 0.47
SPSB3-208ENST00000566339 KLRC4-KLRK1H3BQV0 150 aa18.02■□□□□ 0.47
SPSB3-208ENST00000566339 PSPNO60542 156 aa18.02■□□□□ 0.47
SPSB3-208ENST00000566339 OR52L2PQ8NGH6 319 aa18.02■□□□□ 0.47
SPSB3-208ENST00000566339 HPRT1P00492 218 aa18.01■□□□□ 0.47
SPSB3-208ENST00000566339 ZNF883P0CG24 379 aa18.01■□□□□ 0.47
SPSB3-208ENST00000566339 CD82P27701 267 aa18.01■□□□□ 0.47
SPSB3-208ENST00000566339 CHRNA7P36544 502 aa18.01■□□□□ 0.47
SPSB3-208ENST00000566339 INO80CQ6PI98 192 aaPredicted RBP18.01■□□□□ 0.47
SPSB3-208ENST00000566339 ZDHHC16Q969W1 377 aa18.01■□□□□ 0.47
SPSB3-208ENST00000566339 OR2J1Q9GZK6 312 aa18.01■□□□□ 0.47
SPSB3-208ENST00000566339 CXXC4Q9H2H0 198 aa18.01■□□□□ 0.47
SPSB3-208ENST00000566339 NAGKQ9UJ70 344 aa18.01■□□□□ 0.47
SPSB3-208ENST00000566339 MARCH11A6NNE9 402 aa18■□□□□ 0.47
SPSB3-208ENST00000566339 ZNHIT1O43257 154 aa18■□□□□ 0.47
SPSB3-208ENST00000566339 DMRTC2Q8IXT2 367 aaPredicted RBP18■□□□□ 0.47
SPSB3-208ENST00000566339 ZNF808Q8N4W9 903 aaPredicted RBP18■□□□□ 0.47
SPSB3-208ENST00000566339 R3HDM4Q96D70 268 aa18■□□□□ 0.47
SPSB3-208ENST00000566339 TRBV9A0A0B4J1U6 114 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms