RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 LRRC29Q8WV35 223 aa12.69□□□□□ -0.38
HERC2-207ENST00000564734 STARD4Q96DR4 205 aa12.69□□□□□ -0.38
HERC2-207ENST00000564734 ACACBO00763 2458 aa12.69□□□□□ -0.38
HERC2-207ENST00000564734 DEFB108AA8MXU0 73 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 TRGC2P03986 189 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 ADH4P08319 380 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 NDUFA6P56556 154 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 MSMPQ1L6U9 139 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 FAM90A1Q86YD7 464 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 FAM169BQ8N8A8 192 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 FAM210BQ96KR6 192 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 SSX3Q99909 188 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 OPN3Q9H1Y3 402 aaPredicted RBP12.68□□□□□ -0.38
HERC2-207ENST00000564734 LINC00587B1AMM8 73 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 MBP02144 154 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 MEF2BQ02080 365 aaPredicted RBP12.68□□□□□ -0.38
HERC2-207ENST00000564734 CR1LQ2VPA4 569 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 NCR3LG1Q68D85 454 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 SPNS3Q6ZMD2 512 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 C1orf174Q8IYL3 243 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 Q8N7P7 452 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 NPCDR1Q9BY65 106 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 CTDSP1Q9GZU7 261 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 TRBV24-1A0A075B6N3 115 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 IGKV1D-17A0A075B6S4 117 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 HNF4GQ14541 408 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 OR10G9Q8NGN4 311 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 OR10G7Q8NGN6 311 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 ABHD5Q8WTS1 349 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 SLC25A22Q9H936 323 aa12.68□□□□□ -0.38
HERC2-207ENST00000564734 MARCH11A6NNE9 402 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 C15orf62A8K5M9 175 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 AHRRA9YTQ3 701 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 SPINT2O43291 252 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 DUTP33316 252 aaKnown RBP12.67□□□□□ -0.38
HERC2-207ENST00000564734 CYP2G1PQ6ZSU1 146 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 SEM1Q6ZVN7 128 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 C1orf87Q8N0U7 546 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 NAT8Q9UHE5 227 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 SLC25A15Q9Y619 301 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 PTPRBP23467 1997 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 OR9G9P0C7N8 305 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 RPS16P62249 146 aaKnown RBP12.67□□□□□ -0.38
HERC2-207ENST00000564734 FFAR4Q5NUL3 377 aa12.67□□□□□ -0.38
HERC2-207ENST00000564734 BHLHA15Q7RTS1 189 aaPredicted RBP12.67□□□□□ -0.38
HERC2-207ENST00000564734 QTRT1Q9BXR0 403 aaKnown RBP12.67□□□□□ -0.38
HERC2-207ENST00000564734 SRRM5B3KS81 715 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 TMEM250H0YL14 139 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 KBTBD11O94819 623 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 CFHR2P36980 270 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 SPINK9Q5DT21 86 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 FAM180AQ6UWF9 173 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 R3HDM4Q96D70 268 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 CHD3Q12873 2000 aaKnown RBP12.66□□□□□ -0.38
HERC2-207ENST00000564734 HMGB3O15347 200 aaKnown RBP12.66□□□□□ -0.38
HERC2-207ENST00000564734 MZT1Q08AG7 82 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 P2RY6Q15077 328 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 MORN2Q502X0 79 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 GATAD1Q8WUU5 269 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 GGACTQ9BVM4 153 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 ACTR3CQ9C0K3 210 aaPredicted RBP12.66□□□□□ -0.38
HERC2-207ENST00000564734 MIOXQ9UGB7 285 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 PROCRQ9UNN8 238 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 OPN1MWP04001 364 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 OPN1MW2P0DN77 364 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 OPN1MW3P0DN78 364 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 GZMHP20718 246 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 TMEM241Q24JQ0 296 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 FAM216AQ8WUB2 273 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 DIRC2Q96SL1 478 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 WASF3Q9UPY6 502 aa12.66□□□□□ -0.38
HERC2-207ENST00000564734 FAM90A9PA6NNJ1 464 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 TGOLN2O43493 480 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 PSMB3P49720 205 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 EDDM3AQ14507 147 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 LRP11Q86VZ4 500 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 OR2Z1Q8NG97 314 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 Q8TCH9 128 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 FRZBQ92765 325 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 RAB24Q969Q5 203 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 SMIM7Q9BQ49 75 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 MANBALQ9NQG1 85 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 OR6C3Q9NZP0 311 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 JPT1Q9UK76 154 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 SVILO95425 2214 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 YPEL1O60688 119 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 TRGC1P0CF51 173 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 LOXL3P58215 753 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 SNX22Q96L94 193 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 YPEL2Q96QA6 119 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 PYGO2Q9BRQ0 406 aa12.65□□□□□ -0.38
HERC2-207ENST00000564734 DSPP15924 2871 aaKnown RBP12.64□□□□□ -0.39
HERC2-207ENST00000564734 PFN1P07737 140 aaKnown RBP12.64□□□□□ -0.39
HERC2-207ENST00000564734 SPRNQ5BIV9 151 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 EDARADDQ8WWZ3 215 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 WDR83OSQ9Y284 106 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 MBD3L4A6NDZ8 208 aaPredicted RBP12.64□□□□□ -0.39
HERC2-207ENST00000564734 MBD3L3A6NE82 208 aaPredicted RBP12.64□□□□□ -0.39
HERC2-207ENST00000564734 MBD3L5A6NJ08 208 aaPredicted RBP12.64□□□□□ -0.39
HERC2-207ENST00000564734 SEC14L6B5MCN3 397 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms