RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 PARP12Q9H0J9 701 aaKnown RBP6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 Q9UFV3 132 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 JPT1Q9UK76 154 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 KPTNQ9Y664 436 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 FRYQ5TBA9 3013 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 FAM157AC9JC47 383 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 RAB29O14966 203 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 YPEL1O60688 119 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 CST7O76096 145 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 OR8U8P0C7N1 319 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 P0C879 139 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 CD80P33681 288 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 HBG1P69891 147 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 HBG2P69892 147 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 RELQ04864 619 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 ZNF616Q08AN1 781 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 FAM27E3Q08E93 113 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 DHRS7BQ6IAN0 325 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 Q6ZS46 218 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 ASCL5Q7RTU5 278 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 UBALD1Q8TB05 177 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 GLMPQ8WWB7 406 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 TMEM186Q96B77 213 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 YPEL2Q96QA6 119 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 AGMATQ9BSE5 352 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 PARD6GQ9BYG4 376 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 SH3BGRL3Q9H299 93 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 PSENENQ9NZ42 101 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 OR6C3Q9NZP0 311 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 RNF150Q9ULK6 438 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 GAB2Q9UQC2 676 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 ZNF835Q9Y2P0 537 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 ODAMA1E959 279 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 C16orf97H3BN30 126 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 K7ENP7 123 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 CLDN14O95500 239 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 CLDN1O95832 211 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 H2AFB1P0C5Y9 115 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 SFTA3P0C7M3 94 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 BMP5P22003 454 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 PPP1CCP36873 323 aaKnown RBP6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 UBE2KP61086 200 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 GUCA2BQ16661 112 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 GUK1Q16774 197 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 ZNF561Q8N587 486 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 TMEM217Q8N7C4 229 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 Q8TCH9 128 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 DIRC2Q96SL1 478 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 SCRT1Q9BWW7 348 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 TMEM231Q9H6L2 316 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 RNF7Q9UBF6 113 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 FAM96BQ9Y3D0 163 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 CADP27708 2225 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 USF3Q68DE3 2245 aa6.02□□□□□ -1.45
HERPUD1-209ENST00000564678 AGPAT2O15120 278 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 HBE1P02100 147 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 AREGP15514 252 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 SSTR5P35346 364 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 ASCL1P50553 236 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 RAB2AP61019 212 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 RPL30P62888 115 aaKnown RBP6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 SERF2P84101 59 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 TLE4Q04727 773 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 TNFRSF9Q07011 255 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 ATP6V1FQ16864 119 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 MORN2Q502X0 79 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 AKR1C8PQ5T2L2 129 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 SP5Q6BEB4 398 aaPredicted RBP6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 TCTEX1D2Q8WW35 142 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 ITLN1Q8WWA0 313 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 FAM122AQ96E09 287 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 C14orf79Q96F83 325 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 SDSLQ96GA7 329 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 CIB3Q96Q77 187 aaPredicted RBP6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 PSMG3Q9BT73 122 aaPredicted RBP6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 MRPL37Q9BZE1 423 aaKnown RBP6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 EGLN1Q9GZT9 426 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 FAM234AQ9H0X4 552 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 TP53TG5Q9Y2B4 290 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 PRRC2CQ9Y520 2896 aaKnown RBP6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 DCHS1Q96JQ0 3298 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 LRRC30A6NM36 301 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 ATP6V1G2-DDX39BF2Z307 99 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 F8WDY8 70 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 SIGLEC5O15389 551 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 RBFOX2O43251 390 aaKnown RBP eCLIP6.01□□□□□ -1.451e-7■■■■■ 34.3
HERPUD1-209ENST00000564678 SPRY3O43610 288 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 SCGB2A1O75556 95 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 CGB3P0DN86 165 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 CGB7P0DN87 165 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 FHITP49789 147 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 LOXL3P58215 753 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 TMEM30BQ3MIR4 351 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 GFRALQ6UXV0 394 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 TPRX1Q8N7U7 411 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 FAM213BQ8TBF2 198 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 SCGB1C1Q8TD33 95 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 GPR61Q9BZJ8 451 aa6.01□□□□□ -1.45
HERPUD1-209ENST00000564678 EIF5A2Q9GZV4 153 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms