RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 ECSCRQ19T08 205 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 ZNF66Q6ZN08 573 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 C8orf86Q6ZUL3 223 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 C1QL4Q86Z23 238 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 TEX45Q8NA69 505 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 MINDY2Q8NBR6 621 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 GIMAP1Q8WWP7 306 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 C5orf30Q96GV9 206 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 UBE2E2Q96LR5 201 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 DCUN1D5Q9BTE7 237 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 NAA50Q9GZZ1 169 aaKnown RBP10.48□□□□□ -0.73
CLK3-216ENST00000564468 FOXA2Q9Y261 457 aaPredicted RBP10.48□□□□□ -0.73
CLK3-216ENST00000564468 NUBP2Q9Y5Y2 271 aa10.48□□□□□ -0.73
CLK3-216ENST00000564468 IGKV1D-13A0A0B4J2D9 117 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 A0A1W2PN81 502 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 MEIS3P1A6NDR6 274 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 LINC00473A8K010 186 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 FCN1O00602 326 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 CREBL2O60519 120 aaPredicted RBP10.47□□□□□ -0.73
CLK3-216ENST00000564468 CRYZL1O95825 349 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 PPYP01298 95 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 IGLV1-40P01703 118 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 IGLV2-23P01705 113 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 EIF4EP06730 217 aaKnown RBP10.47□□□□□ -0.73
CLK3-216ENST00000564468 IGKV1-13P0DP09 117 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 CHRNA7P36544 502 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 KIR2DS2P43631 304 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 NDPQ00604 133 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 FXYD3Q14802 87 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 BEAN1Q3B7T3 259 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 ACTBL2Q562R1 376 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 KPRPQ5T749 579 aaPredicted RBP10.47□□□□□ -0.73
CLK3-216ENST00000564468 UNQ5815/PRO19632Q6UWF5 114 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 OVCH2Q7RTZ1 564 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 OR5M8Q8NGP6 311 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 SECTM1Q8WVN6 248 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 C4orf3Q8WVX3 66 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 ARPC1AQ92747 370 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 SNAPC3Q92966 411 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 TMEM68Q96MH6 324 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 BCL7BQ9BQE9 202 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 MCRIP2Q9BUT9 160 aaKnown RBP10.47□□□□□ -0.73
CLK3-216ENST00000564468 SCPEP1Q9HB40 452 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 ANAPC10Q9UM13 185 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 VSIG4Q9Y279 399 aa10.47□□□□□ -0.73
CLK3-216ENST00000564468 FAM25AB3EWG3 89 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 FAM25CB3EWG5 89 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 FAM25GB3EWG6 89 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 CCL24O00175 119 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 SULT1C2O00338 296 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 HPGDSO60760 199 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 FCGR3BO75015 233 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 TPPPO94811 219 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 CRYGBP07316 175 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 NAT1P18440 290 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 ELK1P19419 428 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 AADACP22760 399 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 RAB9AP51151 201 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 UBE2KP61086 200 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 HERV-K104P61576 105 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 OXLD1Q5BKU9 147 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 ETV3LQ6ZN32 361 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 REC114Q7Z4M0 266 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 MRPL41Q8IXM3 137 aaKnown RBP10.46□□□□□ -0.73
CLK3-216ENST00000564468 MFSD4AQ8N468 514 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 LINC00482Q8N8I6 264 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 OR5H2Q8NGV7 314 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 OR4S2Q8NH73 311 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 MYOZ3Q8TDC0 251 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 RAB2BQ8WUD1 216 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 C15orf40Q8WUR7 153 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 TCTEX1D2Q8WW35 142 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 P2RX4Q99571 388 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 AIFM2Q9BRQ8 373 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 SLC5A7Q9GZV3 580 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 EHFQ9NZC4 300 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 A3GALT2U3KPV4 340 aa10.46□□□□□ -0.73
CLK3-216ENST00000564468 NOL3O60936 208 aaKnown RBP10.45□□□□□ -0.74
CLK3-216ENST00000564468 ACTL6BO94805 426 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 IGLV2-14P01704 120 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 FCER2P06734 321 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 EGR2P11161 476 aaPredicted RBP10.45□□□□□ -0.74
CLK3-216ENST00000564468 IGLL1P15814 213 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 RPL5P46777 297 aaKnown RBP10.45□□□□□ -0.74
CLK3-216ENST00000564468 TMBIM6P55061 237 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 GNB1P62873 340 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 CATR1Q13166 79 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 DYRK1AQ13627 763 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 C19orf54Q5BKX5 351 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 DHRS11Q6UWP2 260 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 LCNL1Q6ZST4 164 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 C18orf65Q6ZTR6 163 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 CLVS1Q8IUQ0 354 aaPredicted RBP10.45□□□□□ -0.74
CLK3-216ENST00000564468 ZNF491Q8N8L2 437 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 LFNGQ8NES3 379 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 GRPEL2Q8TAA5 225 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 VSTM2AQ8TAG5 236 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 GPX8Q8TED1 209 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 DPF1Q92782 380 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 SLA2Q9H6Q3 261 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms