RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 TUSC2O75896 110 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 NRASP01111 189 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 KRASP01116 189 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 LHX2P50458 406 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 CARD18P57730 90 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 Q6ZPA2 131 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 HAPLN4Q86UW8 402 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 RPP25LQ8N5L8 163 aaKnown RBP9.34□□□□□ -0.91
TCF4-222ENST00000564228 RBMXL3Q8N7X1 1067 aaKnown RBP9.34□□□□□ -0.91
TCF4-222ENST00000564228 OR10D3Q8NH80 312 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 OR5P3Q8WZ94 311 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 LSM10Q969L4 123 aaKnown RBP9.34□□□□□ -0.91
TCF4-222ENST00000564228 ZNF586Q9NXT0 402 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 HSPB7Q9UBY9 170 aa9.34□□□□□ -0.91
TCF4-222ENST00000564228 MRPS16Q9Y3D3 137 aaKnown RBP9.34□□□□□ -0.91
TCF4-222ENST00000564228 CHTOPQ9Y3Y2 248 aaKnown RBP9.34□□□□□ -0.91
TCF4-222ENST00000564228 ZZEF1O43149 2961 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 LOC105371242A0A075B767 164 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 IGHV2-70DA0A0C4DH43 119 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 AQP7P3A6NL99 342 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 H3BP45 60 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 SPRY1O43609 319 aaPredicted RBP9.33□□□□□ -0.92
TCF4-222ENST00000564228 SYNGR2O43760 224 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 PDE6DO43924 150 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 IGLC2P0DOY2 106 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 IGLC3P0DOY3 106 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 BMP5P22003 454 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 S100GP29377 79 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 CEACAM8P31997 349 aaPredicted RBP9.33□□□□□ -0.92
TCF4-222ENST00000564228 HNRNPA3P51991 378 aaKnown RBP9.33□□□□□ -0.92
TCF4-222ENST00000564228 CLDN15P56746 228 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 SUMO1P63165 101 aaKnown RBP9.33□□□□□ -0.92
TCF4-222ENST00000564228 C3AR1Q16581 482 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 Q6ZS92 163 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FOXL2NBQ6ZUU3 175 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 LYG1Q8N1E2 194 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 KLHDC1Q8N7A1 406 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 Q8N976 141 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 OR56B2PQ8NGI1 322 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 GPR146Q96CH1 333 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 ZDHHC11Q9H8X9 412 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 ZNF71Q9NQZ8 489 aaPredicted RBP9.33□□□□□ -0.92
TCF4-222ENST00000564228 PSENENQ9NZ42 101 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 MED12LQ86YW9 2145 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A10PA6NDY2 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A18PA6NE21 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A16PA6NEW6 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A20PA6NIJ5 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A8PA6NJQ4 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 SLC22A20A6NK97 555 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A7PA6NKC0 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A22PA8MWA6 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A12PA8MX19 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A5PA8MXJ8 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A23PA8MXZ1 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 SERF1AO75920 110 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 CTXN2P0C2S0 81 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM87AP0C7U9 286 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A15PP0C7V4 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A13PP0C7W8 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A14PP0C7W9 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 FAM90A24PP0C7X0 464 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 CRISP2P16562 243 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 MSR1P21757 451 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 CLDN18P56856 261 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 RAC3P60763 192 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 ARL16Q0P5N6 197 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 PIGYQ3MUY2 71 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 SPATA45Q537H7 98 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 ETFRF1Q6IPR1 90 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 LRP11Q86VZ4 500 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 C20orf196Q8IYI0 205 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 CORO2AQ92828 525 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 OR4C12Q96R67 309 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 TAAR6Q96RI8 345 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 PATZ1Q9HBE1 687 aaKnown RBP9.33□□□□□ -0.92
TCF4-222ENST00000564228 CDC42EP3Q9UKI2 254 aa9.33□□□□□ -0.92
TCF4-222ENST00000564228 NCOA6Q14686 2063 aaPredicted RBP9.32□□□□□ -0.92
TCF4-222ENST00000564228 TPRP12270 2363 aaKnown RBP9.32□□□□□ -0.92
TCF4-222ENST00000564228 FREM1Q5H8C1 2179 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 IGKV1-27A0A075B6S5 117 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 SAA2-SAA4A0A096LPE2 208 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 LOC102725191A0A1B0GVB3 256 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 LRP5LA4QPB2 252 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 IGKV1D-33P01593 117 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 IGKV1-33P01594 117 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 REG1AP05451 166 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 F2RP25116 425 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 RBM11P57052 281 aaKnown RBP9.32□□□□□ -0.92
TCF4-222ENST00000564228 TESK1Q15569 626 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 TMEM249Q2WGJ8 235 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 ZGRF1Q86YA3 2104 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 ZNF709Q8N972 641 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 OR5B3Q8NH48 314 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 BORCS8Q96FH0 119 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 OXGR1Q96P68 337 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 SAMD10Q9BYL1 202 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 SPRR3Q9UBC9 169 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 ST3GAL6Q9Y274 331 aa9.32□□□□□ -0.92
TCF4-222ENST00000564228 TLN1Q9Y490 2541 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms