RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 FCAMRQ8WWV6 532 aa12.32□□□□□ -0.44
RNF40-205ENST00000563909 ST6GALNAC6Q969X2 333 aa12.32□□□□□ -0.44
RNF40-205ENST00000563909 RPEQ96AT9 228 aa12.32□□□□□ -0.44
RNF40-205ENST00000563909 GHITMQ9H3K2 345 aa12.32□□□□□ -0.44
RNF40-205ENST00000563909 C19orf73Q9NVV2 129 aa12.32□□□□□ -0.44
RNF40-205ENST00000563909 RDH8Q9NYR8 311 aa12.32□□□□□ -0.44
RNF40-205ENST00000563909 KMT2AQ03164 3969 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 AP4M1O00189 453 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 CTDSPLO15194 276 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 SLC31A2O15432 143 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 FGF16O43320 207 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 RBBP9O75884 186 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 OR8U8P0C7N1 319 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 TMEM11P17152 192 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 RCVRNP35243 200 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 CNPY1Q3B7I2 92 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 FAM131AQ6UXB0 335 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 RNF152Q8N8N0 203 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 OR5AP2Q8NGF4 316 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 OR6Q1Q8NGQ2 317 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 OR1N2Q8NGR9 330 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 TOMM40LQ969M1 308 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 SOSTQ9BQB4 213 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 GON7Q9BXV9 100 aa12.31□□□□□ -0.44
RNF40-205ENST00000563909 GABARAPH6UMI1 98 aa12.3□□□□□ -0.44
RNF40-205ENST00000563909 GAPDHP04406 335 aaKnown RBP12.3□□□□□ -0.44
RNF40-205ENST00000563909 FCER2P06734 321 aa12.3□□□□□ -0.44
RNF40-205ENST00000563909 ELANEP08246 267 aa12.3□□□□□ -0.44
RNF40-205ENST00000563909 PTBP1P26599 531 aaKnown RBP eCLIP12.3□□□□□ -0.44
RNF40-205ENST00000563909 ACTBP60709 375 aa12.3□□□□□ -0.44
RNF40-205ENST00000563909 HAGHQ16775 308 aa12.3□□□□□ -0.44
RNF40-205ENST00000563909 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
RNF40-205ENST00000563909 Q8N1Y9 231 aa12.3□□□□□ -0.44
RNF40-205ENST00000563909 OR52I2Q8NH67 350 aa12.3□□□□□ -0.44
RNF40-205ENST00000563909 SNAPC3Q92966 411 aa12.3□□□□□ -0.44
RNF40-205ENST00000563909 C11orf54Q9H0W9 315 aaPredicted RBP12.3□□□□□ -0.44
RNF40-205ENST00000563909 PIPOXQ9P0Z9 390 aa12.3□□□□□ -0.44
RNF40-205ENST00000563909 OVOL1O14753 267 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 ST8SIA5O15466 376 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 TXNL1O43396 289 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 OR3A3P47888 321 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 ZNF137PP52743 207 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 TAS2R46P59540 309 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 SSBP1Q04837 148 aaKnown RBP12.29□□□□□ -0.44
RNF40-205ENST00000563909 ZNF816Q0VGE8 651 aaPredicted RBP12.29□□□□□ -0.44
RNF40-205ENST00000563909 CDK10Q15131 360 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 RNASE12Q5GAN4 147 aaKnown RBP12.29□□□□□ -0.44
RNF40-205ENST00000563909 SPANXN2Q5MJ10 180 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 ASPHD1Q5U4P2 390 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 CCDC190Q86UF4 302 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 OR8H3Q8N146 312 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 FAM71E2Q8N5Q1 922 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 DCUN1D4Q92564 292 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 KLK11Q9UBX7 282 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 MTFP1Q9UDX5 166 aa12.29□□□□□ -0.44
RNF40-205ENST00000563909 A0A1W2PPI3 338 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 A8MZ25 164 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 HSD17B6O14756 317 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 RAB29O14966 203 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 GSTZ1O43708 216 aaPredicted RBP12.28□□□□□ -0.44
RNF40-205ENST00000563909 OR5H8P0DN80 308 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 ETV6P41212 452 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 GPR12P47775 334 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 ZNF616Q08AN1 781 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 ACTBL2Q562R1 376 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 FAM71F2Q6NXP2 309 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 LYSMD2Q8IV50 215 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 SGPP2Q8IWX5 399 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 OR5H2Q8NGV7 314 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 SMIM4Q8WVI0 70 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 S1PR3Q99500 378 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 AGMATQ9BSE5 352 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 PARP12Q9H0J9 701 aaKnown RBP12.28□□□□□ -0.44
RNF40-205ENST00000563909 IFI27L2Q9H2X8 130 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 ZNF221Q9UK13 617 aa12.28□□□□□ -0.44
RNF40-205ENST00000563909 RBM7Q9Y580 266 aaKnown RBP12.28□□□□□ -0.44
RNF40-205ENST00000563909 LANCL1O43813 399 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 IGKV1D-33P01593 117 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 IGKV1-33P01594 117 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 PMP2P02689 132 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 NFYAP23511 347 aaPredicted RBP12.27□□□□□ -0.45
RNF40-205ENST00000563909 HLA-DMAP28067 261 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 DIAPH2-AS1Q14236 149 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 LINC00299Q6ZSB3 139 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 TGIF2LXQ8IUE1 241 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 ODF3L1Q8IXM7 274 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 GIMAP1Q8WWP7 306 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 RTN4IP1Q8WWV3 396 aaPredicted RBP12.27□□□□□ -0.45
RNF40-205ENST00000563909 PTTG2Q9NZH5 202 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 ZNF107Q9UII5 783 aaPredicted RBP12.27□□□□□ -0.45
RNF40-205ENST00000563909 GAB2Q9UQC2 676 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 OR2W1Q9Y3N9 320 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 V9GYH0 126 aa12.27□□□□□ -0.45
RNF40-205ENST00000563909 SAA2-SAA4A0A096LPE2 208 aa12.26□□□□□ -0.45
RNF40-205ENST00000563909 IGHV1-3A0A0C4DH29 117 aa12.26□□□□□ -0.45
RNF40-205ENST00000563909 ZNF736B4DX44 427 aaPredicted RBP12.26□□□□□ -0.45
RNF40-205ENST00000563909 TUSC2O75896 110 aa12.26□□□□□ -0.45
RNF40-205ENST00000563909 OR8U9P0C7N5 309 aa12.26□□□□□ -0.45
RNF40-205ENST00000563909 SAA2P0DJI9 122 aaPredicted RBP12.26□□□□□ -0.45
RNF40-205ENST00000563909 CNTFRP26992 372 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms