RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 Q0VG73 95 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 ACSM6Q6P461 480 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 ZIC4Q8N9L1 334 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 TNFRSF14Q92956 283 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 ZNF837Q96EG3 531 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 GNB4Q9HAV0 340 aa11.86□□□□□ -0.51
GTF3C1-203ENST00000562609 PCSK5Q92824 1860 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 A0A0J9YW62 118 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 CTXND1A0A1B0GTU2 59 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 ZNF891A8MT65 544 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 KIAA1324LA8MWY0 1029 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 F5H5K5 113 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 C3orf79P0CE67 100 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 RPS20P60866 119 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 ZNF90Q03938 601 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 ABHD3Q8WU67 409 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 PP6455Q8WZ26 134 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 FREM1Q5H8C1 2179 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 NPIPA2E9PIF3 369 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 DHRS3O75911 302 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 NDUFB4O95168 129 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 NAPSAO96009 420 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 GABRA2P47869 451 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 PMP22Q01453 160 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 C6orf15Q6UXA7 325 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 NIT1Q86X76 327 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 WFDC8Q8IUA0 241 aa11.85□□□□□ -0.51
GTF3C1-203ENST00000562609 RIF1Q5UIP0 2472 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 NPIPB13A6NJU9 1138 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 C9orf172C9J069 976 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 NPIPB4C9JG80 1138 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 GNB1P62873 340 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 MRPL49Q13405 166 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 SPINK14Q6IE38 97 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 FRMD6-AS1P0C7T7 363 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 BMI1P35226 326 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 IER3P46695 156 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 DSCR4P56555 118 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 OR4F17Q8NGA8 305 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 OR10G9Q8NGN4 311 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 OR10G7Q8NGN6 311 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 OR5B3Q8NH48 314 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 OR5P3Q8WZ94 311 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 SRXN1Q9BYN0 137 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 DEPPQ9NTK1 212 aa11.84□□□□□ -0.51
GTF3C1-203ENST00000562609 IGKV1D-13A0A0B4J2D9 117 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 CDX4O14627 284 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 SYNGR2O43760 224 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 IGKV1-13P0DP09 117 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 THBS3P49746 956 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 PRRX1P54821 245 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 GFRA1P56159 465 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 HLA-DRB5Q30154 266 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 KRTCAP3Q53RY4 240 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 SLC25A47Q6Q0C1 308 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 DHRS13Q6UX07 377 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 PNKDQ8N490 385 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 ST6GALNAC3Q8NDV1 305 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 OR1K1Q8NGR3 316 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 CCL28Q9NRJ3 127 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 MRPL27Q9P0M9 148 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 OR2T8A6NH00 312 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 SNURFLB1AK76 121 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 TMPRSS2O15393 492 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 DEFA4P12838 97 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 SPANXN5Q5MJ07 72 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 WIPI1Q5MNZ9 446 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 AMMECR1LQ6DCA0 310 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 LCN12Q6JVE5 192 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 Q6ZRM9 215 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 ZNF442Q9H7R0 627 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 SH2D2AQ9NP31 389 aa11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 COL27A1Q8IZC6 1860 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-203ENST00000562609 ZNF816-ZNF321PA0A0X1KG74 233 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 GAGE12BA1L429 117 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 PINLYPA6NC86 204 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 NPIPA3F8WFD2 350 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 P04436 131 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 PRSS12P56730 875 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 CLDN18P56856 261 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 S100A7AQ86SG5 101 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 MUC15Q8N387 334 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 OR5D13Q8NGL4 314 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 RCHY1Q96PM5 261 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 DSPP15924 2871 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 LOC102725191A0A1B0GVB3 256 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 A0A1W2PS18 150 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 CD59P13987 128 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 NTF4P34130 210 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 GRB2P62993 217 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 LRRC10Q5BKY1 277 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 SH3BGRL2Q9UJC5 107 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 TAX1BP3O14907 124 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 SAP30O75446 220 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 CYC1P08574 325 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 ATP5G3P48201 142 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 Q5PR19 223 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 STUMQ69YW2 141 aa11.82□□□□□ -0.52
GTF3C1-203ENST00000562609 ZDHHC23Q8IYP9 409 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms