RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 LAMP3Q9UQV4 416 aa9.67□□□□□ -0.86
PCAT1-202ENST00000561978 MMP24Q9Y5R2 645 aa9.67□□□□□ -0.86
PCAT1-202ENST00000561978 TEX15Q9BXT5 2789 aa9.67□□□□□ -0.86
PCAT1-202ENST00000561978 A0A0G2JRQ6 117 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 KIAA1324LA8MWY0 1029 aaPredicted RBP9.66□□□□□ -0.86
PCAT1-202ENST00000561978 FBP1P09467 338 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 MUC1P15941 1255 aaPredicted RBP9.66□□□□□ -0.86
PCAT1-202ENST00000561978 TNFSF4P23510 183 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 RPL35P42766 123 aaKnown RBP9.66□□□□□ -0.86
PCAT1-202ENST00000561978 GATA4P43694 442 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 GLIPR1P48060 266 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 PRRX1P54821 245 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 PAX9P55771 341 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 SRSF3P84103 164 aaKnown RBP9.66□□□□□ -0.86
PCAT1-202ENST00000561978 ZNF616Q08AN1 781 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 FGFRL1Q8N441 504 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 CD177Q8N6Q3 437 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 OR2G3Q8NGZ4 309 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 TMEM171Q8WVE6 324 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 OR2V2Q96R30 315 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 ATP5SQ99766 215 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 NDRG3Q9UGV2 375 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 ZNF737O75373 536 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 CST7O76096 145 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 TMEM50AO95807 157 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 LHBP01229 141 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 IFNA5P01569 189 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 IGKV1-5P01602 117 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 IFNA4P05014 189 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 THBDP07204 575 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 SNCAP37840 140 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 AKR1D1P51857 326 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 CR1LQ2VPA4 569 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 ATRAIDQ6UW56 229 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 Q6ZRM9 215 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 SSX9Q7RTT3 188 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 NANPQ8TBE9 248 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 HSD17B10Q99714 261 aaKnown RBP9.66□□□□□ -0.86
PCAT1-202ENST00000561978 PBDC1Q9BVG4 233 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 PARP12Q9H0J9 701 aaKnown RBP9.66□□□□□ -0.86
PCAT1-202ENST00000561978 RNF150Q9ULK6 438 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 KIAA2026Q5HYC2 2103 aa9.66□□□□□ -0.86
PCAT1-202ENST00000561978 MAST4O15021 2626 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 ANKRD17O75179 2603 aaKnown RBP9.65□□□□□ -0.86
PCAT1-202ENST00000561978 IGHV2-70P01814 119 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 ADCYAP1P18509 176 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 CD40P25942 277 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 ATP6V0CP27449 155 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 GPX4P36969 197 aaPredicted RBP9.65□□□□□ -0.86
PCAT1-202ENST00000561978 HBG1P69891 147 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 HBG2P69892 147 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 EIF4EBP1Q13541 118 aaPredicted RBP9.65□□□□□ -0.86
PCAT1-202ENST00000561978 MSMPQ1L6U9 139 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 MIDNQ504T8 468 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 VHLLQ6RSH7 139 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 TMEM108Q6UXF1 575 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 DPPA3Q6W0C5 159 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 ZNF295-AS1Q8N0V1 137 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 GCSAMQ8N6F7 178 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 NUP37Q8NFH4 326 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 OR13A1Q8NGR1 328 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 CD300LFQ8TDQ1 290 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 SSX3Q99909 188 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 SH3BGRL3Q9H299 93 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 SMDT1Q9H4I9 107 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 TMEM231Q9H6L2 316 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 ZFAND3Q9H8U3 227 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 PSENENQ9NZ42 101 aa9.65□□□□□ -0.86
PCAT1-202ENST00000561978 IGKV1D-17A0A075B6S4 117 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 A0A1B0GV90 55 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 ODAMA1E959 279 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 BTBD17A6NE02 478 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 DNASE2O00115 360 aaPredicted RBP9.64□□□□□ -0.87
PCAT1-202ENST00000561978 AGPAT2O15120 278 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 SPRY3O43610 288 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 NXPH3O95157 252 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 STAG3L3P0CL85 134 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 CD80P33681 288 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 TMEM182Q6ZP80 229 aaPredicted RBP9.64□□□□□ -0.87
PCAT1-202ENST00000561978 MOGAT3Q86VF5 341 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 THNSL2Q86YJ6 484 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 WFDC8Q8IUA0 241 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 PUSL1Q8N0Z8 303 aaKnown RBP9.64□□□□□ -0.87
PCAT1-202ENST00000561978 TMEM217Q8N7C4 229 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 OR6C3Q9NZP0 311 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 JPT1Q9UK76 154 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 FAM96BQ9Y3D0 163 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 A0A1B0GW64 132 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 C15orf65H3BRN8 121 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 K7N7A8 449 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 SFTA3P0C7M3 94 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 EGR1P18146 543 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 SSTR5P35346 364 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 PPP1CCP36873 323 aaKnown RBP9.64□□□□□ -0.87
PCAT1-202ENST00000561978 RAB2AP61019 212 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 EDDM3AQ14507 147 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 ODF3L1Q8IXM7 274 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 ZNF561Q8N587 486 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 FAM213BQ8TBF2 198 aa9.64□□□□□ -0.87
PCAT1-202ENST00000561978 TCTEX1D2Q8WW35 142 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms