RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CNIH1O95406 144 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 IGHV3-11P01762 117 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 HSPB1P04792 205 aaKnown RBP7.94□□□□□ -1.14
CLK3-205ENST00000561673 DTYMKP23919 212 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 CD40LGP29965 261 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 TPPP2P59282 170 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 ZNF429Q86V71 674 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 H1FOOQ8IZA3 346 aaPredicted RBP7.94□□□□□ -1.14
CLK3-205ENST00000561673 BVESQ8NE79 360 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 OR5T1Q8NG75 326 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 FCGR1BQ92637 280 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 RHOVQ96L33 236 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 CENPOQ9BU64 300 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 ST6GALNAC5Q9BVH7 336 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 Q9H521 79 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 DAPK2Q9UIK4 370 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 STUB1Q9UNE7 303 aa7.94□□□□□ -1.14
CLK3-205ENST00000561673 ZNF256Q9Y2P7 627 aaPredicted RBP7.94□□□□□ -1.14
CLK3-205ENST00000561673 RBM7Q9Y580 266 aaKnown RBP7.94□□□□□ -1.14
CLK3-205ENST00000561673 NBEAL2Q6ZNJ1 2754 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 J3QRK9 145 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 SHOXO15266 292 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 TRGV3P03979 118 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 DUTP33316 252 aaKnown RBP7.93□□□□□ -1.14
CLK3-205ENST00000561673 ARL6IP1Q15041 203 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 MRGPRG-AS1Q2M3A8 158 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 TMEM177Q53S58 311 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 HACD4Q5VWC8 232 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 ZNF773Q6PK81 442 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 TPRA1Q86W33 373 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 DDB2Q92466 427 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 HARBI1Q96MB7 349 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 OR51E2Q9H255 320 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 SLA2Q9H6Q3 261 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 RNF167Q9H6Y7 350 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLK3-205ENST00000561673 ZNF355PQ9NSJ1 428 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 SSR3Q9UNL2 185 aa7.93□□□□□ -1.14
CLK3-205ENST00000561673 TMEM235A6NFC5 223 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 LINC00473A8K010 186 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 SAP30O75446 220 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 LY86O95711 162 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 CLEC2LP0C7M8 214 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 NHLRC4P0CG21 123 aaPredicted RBP7.92□□□□□ -1.14
CLK3-205ENST00000561673 RRASP10301 218 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 SDC2P34741 201 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 CBX3Q13185 183 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 RTL8BQ17RB0 113 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 ACSM6Q6P461 480 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 SFXN4Q6P4A7 337 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 POC5Q8NA72 575 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 NUDCD2Q8WVJ2 157 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 ADTRPQ96IZ2 230 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 DCSTAMPQ9H295 470 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 RRP15Q9Y3B9 282 aaKnown RBP7.92□□□□□ -1.14
CLK3-205ENST00000561673 DNAH7Q8WXX0 4024 aa7.92□□□□□ -1.14
CLK3-205ENST00000561673 RYR3Q15413 4870 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 C13orf42A0A1B0GVH6 325 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 H3BUA1 57 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 SSX5O60225 188 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 CRYZL1O95825 349 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 IGLV2-14P01704 120 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 HLA-DQB1P01920 261 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 NFYAP23511 347 aaPredicted RBP7.91□□□□□ -1.14
CLK3-205ENST00000561673 UBE2KP61086 200 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 PITPNAQ00169 270 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 MXD1Q05195 221 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 PRSS8Q16651 343 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 IDO2Q6ZQW0 420 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 TEX45Q8NA69 505 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 LGALS14Q8TCE9 139 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 TMEM68Q96MH6 324 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 ASCL2Q99929 193 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 OR2W1Q9Y3N9 320 aa7.91□□□□□ -1.14
CLK3-205ENST00000561673 IGKV1D-13A0A0B4J2D9 117 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 A0A0G2JLM5 398 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 LOC100506127A0A0U1RQW1 187 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 ANKRD34BA5PLL1 514 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 MSGN1A6NI15 193 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 SCGNO76038 276 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 BRI3O95415 125 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 CTXN2P0C2S0 81 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 APELAP0DMC3 54 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 IGKV1-13P0DP09 117 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 SPNP16150 400 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 GNG2P59768 71 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 RPL30P62888 115 aaKnown RBP7.9□□□□□ -1.14
CLK3-205ENST00000561673 VMA21Q3ZAQ7 101 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 CNIH2Q6PI25 160 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 ZNF645Q8N7E2 425 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 OR5H6Q8NGV6 325 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 OSR1Q8TAX0 266 aaPredicted RBP7.9□□□□□ -1.14
CLK3-205ENST00000561673 WWC2-AS2Q96NR7 200 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 TINAGL1Q9GZM7 467 aaPredicted RBP7.9□□□□□ -1.14
CLK3-205ENST00000561673 RANGRFQ9HD47 186 aaPredicted RBP7.9□□□□□ -1.14
CLK3-205ENST00000561673 RHBDL2Q9NX52 303 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 SMAD5-AS1Q9Y6J3 95 aa7.9□□□□□ -1.14
CLK3-205ENST00000561673 FCGR3BO75015 233 aa7.89□□□□□ -1.15
CLK3-205ENST00000561673 RBMXL2O75526 392 aaKnown RBP7.89□□□□□ -1.15
CLK3-205ENST00000561673 TUSC2O75896 110 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms