RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 DAZ1Q9NQZ3 744 aaKnown RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 DAZ3Q9NR90 486 aaKnown RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 RASL12Q9NYN1 266 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 ZNRD1Q9P1U0 126 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 RPS6KB2Q9UBS0 482 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 ZNF222Q9UK12 451 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 CSAG2Q9Y5P2 127 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 TRAPPC1Q9Y5R8 145 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 BCORL1Q5H9F3 1711 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 NEO1Q92859 1461 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 PPRC1Q5VV67 1664 aaKnown RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 RIMS1Q86UR5 1692 aaKnown RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 ABCA5Q8WWZ7 1642 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 MADDQ8WXG6 1647 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 CPDO75976 1380 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 NID2Q14112 1375 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 SCN5AQ14524 2016 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 RALGAPA1Q6GYQ0 2036 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 CPS1P31327 1500 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 TRBV19A0A075B6N1 114 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 IGKV3D-15A0A087WSY6 115 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 IGKV6D-21A0A0A0MT36 114 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 A0A1B0GW54 56 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 DUXBA0A1W2PPF3 345 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 A0A1W2PQ67 120 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 A0A1W2PRE2 83 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 TMEM189A5PLL7 270 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 DPRXA6NFQ7 191 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 OR5H14A6NHG9 310 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 RFPL4AA6NLU0 287 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 C4orf51C9J302 202 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 C5orf58C9J3I9 102 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 CLDN25C9JDP6 229 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 RFPL4AL1F8VTS6 287 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 H0YJW9 148 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 TRAPPC2LH3BP13 241 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 J3KT08 172 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 J3QR89 54 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 DEGS1O15121 323 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 TRAF3IP2O43734 574 aaPredicted RBP1.47□□□□□ -2.17
RTF1-207ENST00000561076 OR7C2O60412 319 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 OPN1SWP03999 348 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 SRP19P09132 144 aaKnown RBP1.47□□□□□ -2.17
RTF1-207ENST00000561076 LGALS1P09382 135 aaKnown RBP1.47□□□□□ -2.17
RTF1-207ENST00000561076 CD7P09564 240 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 P0C879 139 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 PTHLHP12272 177 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 FOLR2P14207 255 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 CCL1P22362 96 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 S100A7P31151 101 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 CCR6P51684 374 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 NDUFA6P56556 154 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 RPS20P60866 119 aaKnown RBP1.47□□□□□ -2.17
RTF1-207ENST00000561076 IGLV3-21P80748 117 aaPredicted RBP1.47□□□□□ -2.17
RTF1-207ENST00000561076 RUNX1Q01196 453 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 HTR4Q13639 388 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 ENDOGQ14249 297 aaKnown RBP1.47□□□□□ -2.17
RTF1-207ENST00000561076 MMDQ15546 238 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 CST6Q15828 149 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 C12orf74Q32Q52 190 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 KRTAP27-1Q3LI81 207 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 RNF212Q495C1 297 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 LUZP6Q538Z0 58 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 BCL2L15Q5TBC7 163 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 ZC2HC1BQ5TFG8 222 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 ZFP1Q6P2D0 407 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 AMTNQ6UX39 209 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 ALKAL1Q6UXT8 129 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 TRAPPC6BQ86SZ2 158 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 LINC01551Q86U37 167 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 LRP11Q86VZ4 500 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 MKXQ8IYA7 352 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 C1orf174Q8IYL3 243 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 UMODL1-AS1Q8N2C9 162 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 OSR2Q8N2R0 312 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.47□□□□□ -2.17
RTF1-207ENST00000561076 ZNF615Q8N8J6 731 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 LINC01555Q8NAE3 123 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 ST6GALNAC3Q8NDV1 305 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 OR4D11Q8NGI4 311 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 OR5A1Q8NGJ0 315 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 OR13C8Q8NGS7 320 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 OR4K13Q8NH42 304 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 OR4A5Q8NH83 315 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 CD200R1Q8TD46 325 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 C1orf54Q8WWF1 131 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 RTN4IP1Q8WWV3 396 aaPredicted RBP1.47□□□□□ -2.17
RTF1-207ENST00000561076 KLK6Q92876 244 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 ZNF689Q96CS4 500 aaPredicted RBP1.47□□□□□ -2.17
RTF1-207ENST00000561076 CMBLQ96DG6 245 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 PYURFQ96I23 114 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 C2orf50Q96LR7 162 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 IMMP1LQ96LU5 166 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 FOPNLQ96NB1 174 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 TSPAN32Q96QS1 320 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 MGLLQ99685 303 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 SPIN2AQ99865 258 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 SPIN2BQ9BPZ2 258 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 C1QTNF6Q9BXI9 259 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 NKX6-2Q9C056 277 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms