RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 NICN1Q9BSH3 213 aa13.86□□□□□ -0.19
TPM1-226ENST00000560959 Q9N2K0 584 aa13.86□□□□□ -0.19
TPM1-226ENST00000560959 RYR1P21817 5038 aa13.86□□□□□ -0.19
TPM1-226ENST00000560959 SRMP19623 302 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 SERPINB10P48595 397 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 UBE2KP61086 200 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 QRFPP83859 136 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 ZNF45Q02386 682 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 PRSS8Q16651 343 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 ZNF57Q68EA5 555 aaPredicted RBP13.85□□□□□ -0.19
TPM1-226ENST00000560959 LYG2Q86SG7 212 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 TTC9CQ8N5M4 171 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 OR52B4Q8NGK2 314 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 SRSF12Q8WXF0 261 aaKnown RBP13.85□□□□□ -0.19
TPM1-226ENST00000560959 RDH8Q9NYR8 311 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 AK3Q9UIJ7 227 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 HSF4Q9ULV5 492 aa13.85□□□□□ -0.19
TPM1-226ENST00000560959 TMEM14DPA8MWL7 114 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 BPNT1O95861 308 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 APELAP0DMC3 54 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 CD37P11049 281 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 EWSR1Q01844 656 aaKnown RBP eCLIP13.84□□□□□ -0.19
TPM1-226ENST00000560959 UNC119Q13432 240 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 TPBGQ13641 420 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 RTL8BQ17RB0 113 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 VMA21Q3ZAQ7 101 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 FAM89BQ8N5H3 189 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 GATAD1Q8WUU5 269 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 SPIN2AQ99865 258 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 SPIN2BQ9BPZ2 258 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 C12orf4Q9NQ89 552 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 KIAA1109Q2LD37 5005 aa13.84□□□□□ -0.19
TPM1-226ENST00000560959 IGKV1-6A0A0C4DH72 117 aa13.83□□□□□ -0.2
TPM1-226ENST00000560959 UBE2CO00762 179 aa13.83□□□□□ -0.2
TPM1-226ENST00000560959 MPPED1O15442 326 aa13.83□□□□□ -0.2
TPM1-226ENST00000560959 SPRY2O43597 315 aa13.83□□□□□ -0.2
TPM1-226ENST00000560959 TNXAQ16473 311 aa13.83□□□□□ -0.2
TPM1-226ENST00000560959 SLC25A42Q86VD7 318 aa13.83□□□□□ -0.2
TPM1-226ENST00000560959 TMEM61Q8N0U2 210 aa13.83□□□□□ -0.2
TPM1-226ENST00000560959 TMEM217Q8N7C4 229 aa13.83□□□□□ -0.2
TPM1-226ENST00000560959 PHYHIPQ92561 330 aa13.83□□□□□ -0.2
TPM1-226ENST00000560959 HDHD3Q9BSH5 251 aaPredicted RBP13.83□□□□□ -0.2
TPM1-226ENST00000560959 SDHAF2Q9NX18 166 aa13.83□□□□□ -0.2
TPM1-226ENST00000560959 A0A0A6YYD4 124 aa13.82□□□□□ -0.2
TPM1-226ENST00000560959 TRAV25A0A0B4J276 109 aa13.82□□□□□ -0.2
TPM1-226ENST00000560959 TRDCB7Z8K6 153 aa13.82□□□□□ -0.2
TPM1-226ENST00000560959 DEDDO75618 318 aa13.82□□□□□ -0.2
TPM1-226ENST00000560959 OR2C1O95371 312 aa13.82□□□□□ -0.2
TPM1-226ENST00000560959 PRH1P02810 166 aa13.82□□□□□ -0.2
TPM1-226ENST00000560959 CELP19835 753 aa13.82□□□□□ -0.2
TPM1-226ENST00000560959 APOC4P55056 127 aa13.82□□□□□ -0.2
TPM1-226ENST00000560959 C15orf32Q32M92 178 aa13.82□□□□□ -0.2
TPM1-226ENST00000560959 LRRTM1Q86UE6 522 aa13.82□□□□□ -0.2
TPM1-226ENST00000560959 URM1Q9BTM9 101 aaKnown RBP13.82□□□□□ -0.2
TPM1-226ENST00000560959 VPS13DQ5THJ4 4388 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 PNMA8CA0A1B0GUJ8 204 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 EFCAB10A6NFE3 127 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 A8MWP6 167 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 SOCS1O15524 211 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 CREBL2O60519 120 aaPredicted RBP13.81□□□□□ -0.2
TPM1-226ENST00000560959 DIRAS3O95661 229 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 EDN2P20800 178 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 FAM106AQ4KMX7 169 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 ZNF555Q8NEP9 628 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 OR4A4PQ8NGN8 299 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 ADTRPQ96IZ2 230 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 LPAR5Q9H1C0 372 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 OR2D2Q9H210 308 aa13.81□□□□□ -0.2
TPM1-226ENST00000560959 TMEM213A2RRL7 107 aa13.8□□□□□ -0.2
TPM1-226ENST00000560959 FOXI3A8MTJ6 420 aaPredicted RBP13.8□□□□□ -0.2
TPM1-226ENST00000560959 PPP5D1E7EU14 171 aa13.8□□□□□ -0.2
TPM1-226ENST00000560959 TM4SF20Q53R12 229 aa13.8□□□□□ -0.2
TPM1-226ENST00000560959 OR4A47Q6IF82 309 aa13.8□□□□□ -0.2
TPM1-226ENST00000560959 C10orf67Q8IYJ2 551 aa13.8□□□□□ -0.2
TPM1-226ENST00000560959 OSR1Q8TAX0 266 aaPredicted RBP13.8□□□□□ -0.2
TPM1-226ENST00000560959 GGHQ92820 318 aa13.8□□□□□ -0.2
TPM1-226ENST00000560959 MLXQ9UH92 298 aa13.8□□□□□ -0.2
TPM1-226ENST00000560959 ZNF257Q9Y2Q1 563 aa13.8□□□□□ -0.2
TPM1-226ENST00000560959 KIR2DL5BA0A0G2JN68 375 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 KIR2DL5BA0A0G2JPC4 375 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 OR2J3O76001 311 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 ACTL6BO94805 426 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 HLA-AP01891 365 aaKnown RBP13.79□□□□□ -0.2
TPM1-226ENST00000560959 TMEM50BP56557 158 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 ST3GAL4Q11206 333 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 ACSM3Q53FZ2 586 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 KIR2DL5AQ8N109 375 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 MS4A15Q8N5U1 240 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 UXS1Q8NBZ7 420 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 KIR2DL5BQ8NHK3 375 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 PHLDA1Q8WV24 401 aaPredicted RBP13.79□□□□□ -0.2
TPM1-226ENST00000560959 ACOT12Q8WYK0 555 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 RNF183Q96D59 192 aa13.79□□□□□ -0.2
TPM1-226ENST00000560959 CMSS1Q9BQ75 279 aaKnown RBP13.79□□□□□ -0.2
TPM1-226ENST00000560959 C8orf88P0DMB2 117 aa13.78□□□□□ -0.2
TPM1-226ENST00000560959 CDK10Q15131 360 aa13.78□□□□□ -0.2
TPM1-226ENST00000560959 KLK9Q2XQG4 91 aa13.78□□□□□ -0.2
TPM1-226ENST00000560959 MMD2Q8IY49 270 aa13.78□□□□□ -0.2
TPM1-226ENST00000560959 OR6M1Q8NGM8 313 aa13.78□□□□□ -0.2
TPM1-226ENST00000560959 CACNG8Q8WXS5 425 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms