RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 LAMP3Q9UQV4 416 aa12.12□□□□□ -0.47
CRTC3-210ENST00000560927 ZNF318Q5VUA4 2279 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 CXorf65A6NEN9 183 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 C15orf62A8K5M9 175 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 MGST3O14880 152 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 GZMHP20718 246 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 LOXL3P58215 753 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 FFAR4Q5NUL3 377 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 NCMAPQ5T1S8 102 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 C1orf229Q6ZS94 237 aaPredicted RBP12.11□□□□□ -0.47
CRTC3-210ENST00000560927 C22orf34Q6ZV56 151 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 C1orf174Q8IYL3 243 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 OR10G9Q8NGN4 311 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 OR10G7Q8NGN6 311 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 NANPQ8TBE9 248 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 GATAD1Q8WUU5 269 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 EDARADDQ8WWZ3 215 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 LEAP2Q969E1 77 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 SNX22Q96L94 193 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 CIB3Q96Q77 187 aaPredicted RBP12.11□□□□□ -0.47
CRTC3-210ENST00000560927 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
CRTC3-210ENST00000560927 SDF2L1Q9HCN8 221 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 AKAP13Q12802 2813 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 M0R1X1 148 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 KIAA0141Q14154 515 aaPredicted RBP12.11□□□□□ -0.47
CRTC3-210ENST00000560927 ZNF674Q2M3X9 581 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 TIMM23BQ5SRD1 257 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 WDR25Q64LD2 544 aaPredicted RBP12.11□□□□□ -0.47
CRTC3-210ENST00000560927 ITLN1Q8WWA0 313 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 SSX3Q99909 188 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
CRTC3-210ENST00000560927 SMG1Q96Q15 3661 aaKnown RBP12.11□□□□□ -0.47
CRTC3-210ENST00000560927 ZNF292O60281 2723 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 SLC31A2O15432 143 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 CYB5BO43169 146 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 CRYAAP02489 173 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 S100A8P05109 93 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 CFHR2P36980 270 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 KLF3P57682 345 aaPredicted RBP12.1□□□□□ -0.47
CRTC3-210ENST00000560927 NKX6-1P78426 367 aaPredicted RBP12.1□□□□□ -0.47
CRTC3-210ENST00000560927 VWC2Q2TAL6 325 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 DUX4L9Q6RFH8 374 aaPredicted RBP12.1□□□□□ -0.47
CRTC3-210ENST00000560927 IFI27L2Q9H2X8 130 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 B4DEV8 164 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 CLN5O75503 358 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 IFNA1P01562 189 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 MDKP21741 143 aaPredicted RBP12.1□□□□□ -0.47
CRTC3-210ENST00000560927 MEF2BQ02080 365 aaPredicted RBP12.1□□□□□ -0.47
CRTC3-210ENST00000560927 CR1LQ2VPA4 569 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 OR6C3Q9NZP0 311 aa12.1□□□□□ -0.47
CRTC3-210ENST00000560927 ICE1Q9Y2F5 2266 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 TRAV3A0A0B4J244 114 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 CTXND1A0A1B0GTU2 59 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 YPEL1O60688 119 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 LHBP01229 141 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 GLRXP35754 106 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 GNB2P62879 340 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 PNRC1Q12796 327 aaPredicted RBP12.09□□□□□ -0.47
CRTC3-210ENST00000560927 IGFL3Q6UXB1 125 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 Q8N7P7 452 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 YPEL2Q96QA6 119 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 RP1L1Q8IWN7 2480 aaPredicted RBP12.09□□□□□ -0.47
CRTC3-210ENST00000560927 TM4SF5O14894 197 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 YIF1AO95070 293 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 CYB5R3P00387 301 aaPredicted RBP12.09□□□□□ -0.47
CRTC3-210ENST00000560927 HPRT1P00492 218 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 SMIM6P0DI80 62 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 PRAMEF5Q5TYX0 476 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 Q6ZS92 163 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 RAB24Q969Q5 203 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 CALYQ9NYX4 217 aa12.09□□□□□ -0.47
CRTC3-210ENST00000560927 F2RL2O00254 374 aa12.08□□□□□ -0.48
CRTC3-210ENST00000560927 PPP1R35Q8TAP8 253 aa12.08□□□□□ -0.48
CRTC3-210ENST00000560927 HCFC1P51610 2035 aa12.08□□□□□ -0.48
CRTC3-210ENST00000560927 DSCAMO60469 2012 aa12.08□□□□□ -0.48
CRTC3-210ENST00000560927 TRGC2P03986 189 aa12.08□□□□□ -0.48
CRTC3-210ENST00000560927 FAM27E3Q08E93 113 aa12.08□□□□□ -0.48
CRTC3-210ENST00000560927 C17orf58Q2M2W7 97 aa12.08□□□□□ -0.48
CRTC3-210ENST00000560927 GCSAMLQ5JQS6 135 aa12.08□□□□□ -0.48
CRTC3-210ENST00000560927 C1orf185Q5T7R7 199 aa12.08□□□□□ -0.48
CRTC3-210ENST00000560927 RPUSD4Q96CM3 377 aaKnown RBP12.08□□□□□ -0.48
CRTC3-210ENST00000560927 SMIM7Q9BQ49 75 aa12.08□□□□□ -0.48
CRTC3-210ENST00000560927 IGLV3-9A0A075B6K5 115 aa12.07□□□□□ -0.48
CRTC3-210ENST00000560927 CLDN34H7C241 214 aa12.07□□□□□ -0.48
CRTC3-210ENST00000560927 MBP02144 154 aa12.07□□□□□ -0.48
CRTC3-210ENST00000560927 AARDQ4LEZ3 155 aa12.07□□□□□ -0.48
CRTC3-210ENST00000560927 ZNF709Q8N972 641 aa12.07□□□□□ -0.48
CRTC3-210ENST00000560927 ACTR3CQ9C0K3 210 aaPredicted RBP12.07□□□□□ -0.48
CRTC3-210ENST00000560927 DOK5Q9P104 306 aa12.07□□□□□ -0.48
CRTC3-210ENST00000560927 RRHO14718 337 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 S100A9P06702 114 aaKnown RBP12.06□□□□□ -0.48
CRTC3-210ENST00000560927 CGB3P0DN86 165 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 CGB7P0DN87 165 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 PSMB3P49720 205 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 RND2P52198 227 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 NDUFA6P56556 154 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 RBMXL3Q8N7X1 1067 aaKnown RBP12.06□□□□□ -0.48
CRTC3-210ENST00000560927 OR4A16Q8NH70 328 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 TMEM242Q9NWH2 141 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms