RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ZNF137PP52743 207 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 POU2AF1Q16633 256 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 WDR25Q64LD2 544 aaPredicted RBP10.55□□□□□ -0.72
SNX1-211ENST00000560829 RNF141Q8WVD5 230 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 GINS3Q9BRX5 216 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 UBTD1Q9HAC8 227 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 SESN1Q9Y6P5 492 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 DSCAML1Q8TD84 2053 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 J3QR06 171 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 F12P00748 615 aaPredicted RBP10.55□□□□□ -0.72
SNX1-211ENST00000560829 SULT1A1P50225 295 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 ZNF266Q14584 549 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 DHRS7BQ6IAN0 325 aaPredicted RBP10.55□□□□□ -0.72
SNX1-211ENST00000560829 STPG2Q8N412 459 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 LY6G5BQ8NDX9 201 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 OR9G1Q8NH87 305 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 TNFRSF14Q92956 283 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 CITED4Q96RK1 184 aa10.55□□□□□ -0.72
SNX1-211ENST00000560829 OR9G9P0C7N8 305 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 SEC11BP0C7V7 166 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 CDKN1AP38936 164 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 ERVK-16P61578 105 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 TAGLNQ01995 201 aaKnown RBP10.54□□□□□ -0.72
SNX1-211ENST00000560829 PDLIM3Q53GG5 364 aaPredicted RBP10.54□□□□□ -0.72
SNX1-211ENST00000560829 STX12Q86Y82 276 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 ST6GALNAC6Q969X2 333 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 TMEM186Q96B77 213 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 REG4Q9BYZ8 158 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 TMEM133Q9H2Q1 129 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 RBKSQ9H477 322 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 PATZ1Q9HBE1 687 aaKnown RBP10.54□□□□□ -0.72
SNX1-211ENST00000560829 PSENENQ9NZ42 101 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 ZNRD1Q9P1U0 126 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 CACFD1Q9UGQ2 172 aa10.54□□□□□ -0.72
SNX1-211ENST00000560829 KLF2Q9Y5W3 355 aaPredicted RBP10.54□□□□□ -0.72
SNX1-211ENST00000560829 CST7O76096 145 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 LY86O95711 162 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 IAPPP10997 89 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 EFNA4P52798 201 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 ZNF843Q8N446 348 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 OR5C1Q8NGR4 320 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 PFDN2Q9UHV9 154 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 PPIAL4CA0A0B4J2A2 164 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 MFSD2BA6NFX1 497 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 H3BP45 60 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 OVOL3O00110 214 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 CRYZL1O95825 349 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 PRB1P04280 392 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 PPIAL4GP0DN37 164 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 SPP1P10451 314 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 SULT1A2P50226 295 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 DYNLT3P51808 116 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 RELBQ01201 579 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 TMEM14EPQ6UXP3 125 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 ZNF429Q86V71 674 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 ABHD12Q8N2K0 398 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 EIF4E3Q8N5X7 224 aaKnown RBP10.53□□□□□ -0.72
SNX1-211ENST00000560829 OR5AN1Q8NGI8 311 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 IGFBPL1Q8WX77 278 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 SAT2Q96F10 170 aaPredicted RBP10.53□□□□□ -0.72
SNX1-211ENST00000560829 CIB3Q96Q77 187 aaPredicted RBP10.53□□□□□ -0.72
SNX1-211ENST00000560829 SLC35D1Q9NTN3 355 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 TMEM140Q9NV12 185 aa10.53□□□□□ -0.72
SNX1-211ENST00000560829 HRNRQ86YZ3 2850 aaPredicted RBP10.52□□□□□ -0.72
SNX1-211ENST00000560829 HRASP01112 189 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 IL6RP08887 468 aaPredicted RBP10.52□□□□□ -0.73
SNX1-211ENST00000560829 TLE4Q04727 773 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 RTL8BQ17RB0 113 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 HSD17B13Q7Z5P4 300 aaPredicted RBP10.52□□□□□ -0.73
SNX1-211ENST00000560829 OR1S2Q8NGQ3 325 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 OR10X1Q8NGY0 326 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 DTD1Q8TEA8 209 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 MARVELD3Q96A59 401 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 RHOVQ96L33 236 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 ATP5SQ99766 215 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 SPOCK3Q9BQ16 436 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 ARID1AO14497 2285 aa10.52□□□□□ -0.73
SNX1-211ENST00000560829 C1QL1O75973 258 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 DFFBO76075 338 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 IGLV1-47P01700 117 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 LIPFP07098 398 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 GPR6P46095 362 aaPredicted RBP10.51□□□□□ -0.73
SNX1-211ENST00000560829 SPCS3P61009 180 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 CLINT1Q14677 625 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 AANATQ16613 207 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 OR4A16Q8NH70 328 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 AIFM2Q9BRQ8 373 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 PCGF1Q9BSM1 259 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 QTRT1Q9BXR0 403 aaKnown RBP10.51□□□□□ -0.73
SNX1-211ENST00000560829 MRPL20Q9BYC9 149 aaKnown RBP10.51□□□□□ -0.73
SNX1-211ENST00000560829 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 ABCA4P78363 2273 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 IGHV2-26A0A0B4J1V2 119 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 hCG_1809904A0A1W2PP81 198 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 A0A1W2PPE2 198 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 A0A1W2PR64 198 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 A0A1W2PRV1 198 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 C22orf46C9J442 243 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 H0YJW9 148 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms