RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 COL7A1Q02388 2944 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 MSGN1A6NI15 193 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 TRIM64CA6NLI5 447 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 CRYZL1O95825 349 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 GP9P14770 177 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 GALP22466 123 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 RTL8BQ17RB0 113 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 MRGPRG-AS1Q2M3A8 158 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 TMEM177Q53S58 311 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 IDO2Q6ZQW0 420 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 SPARTQ8N0X7 666 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 OR6Q1Q8NGQ2 317 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 RSRP1Q9BUV0 290 aa7.85□□□□□ -1.15
LDLR-214ENST00000560628 TXNL4BQ9NX01 149 aaKnown RBP7.85□□□□□ -1.15
LDLR-214ENST00000560628 A0A0G2JLM5 398 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 LINC00473A8K010 186 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 NOTOA8MTQ0 251 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 DIRAS3O95661 229 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 ATP6V1G2O95670 118 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 RRASP10301 218 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 NFYAP23511 347 aaPredicted RBP7.84□□□□□ -1.15
LDLR-214ENST00000560628 DUTP33316 252 aaKnown RBP7.84□□□□□ -1.15
LDLR-214ENST00000560628 GABARAPL2P60520 117 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 TAGLNQ01995 201 aaKnown RBP7.84□□□□□ -1.15
LDLR-214ENST00000560628 TNXAQ16473 311 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 SRSF7Q16629 238 aaKnown RBP eCLIP7.84□□□□□ -1.15
LDLR-214ENST00000560628 PRSS8Q16651 343 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 VMA21Q3ZAQ7 101 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 UBE2UQ5VVX9 321 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 Q6ZS49 121 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 DDB2Q92466 427 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 ADTRPQ96IZ2 230 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 PHB2Q99623 299 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 DCUN1D5Q9BTE7 237 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 ELOVL1Q9BW60 279 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 RANGRFQ9HD47 186 aaPredicted RBP7.84□□□□□ -1.15
LDLR-214ENST00000560628 COA4Q9NYJ1 87 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 DAPK2Q9UIK4 370 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 SSR3Q9UNL2 185 aa7.84□□□□□ -1.15
LDLR-214ENST00000560628 RRP15Q9Y3B9 282 aaKnown RBP7.84□□□□□ -1.15
LDLR-214ENST00000560628 TMEM235A6NFC5 223 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 H3BUA1 57 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 MRPS14O60783 128 aaKnown RBP7.83□□□□□ -1.16
LDLR-214ENST00000560628 FCGR3BO75015 233 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 RBMXL2O75526 392 aaKnown RBP7.83□□□□□ -1.16
LDLR-214ENST00000560628 TUSC2O75896 110 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 TRBV12-3P01733 135 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 PRH1P02810 166 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 CLEC2LP0C7M8 214 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 FRMD6-AS1P0C7T7 363 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 ZP3P21754 424 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 DTYMKP23919 212 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 FGF9P31371 208 aaPredicted RBP7.83□□□□□ -1.16
LDLR-214ENST00000560628 SYNJ2BPP57105 145 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 UBE2KP61086 200 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 KLF5Q13887 457 aaPredicted RBP7.83□□□□□ -1.16
LDLR-214ENST00000560628 ARL6IP1Q15041 203 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 OR2B11Q5JQS5 317 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 HACD4Q5VWC8 232 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 ANKRD13BQ86YJ7 626 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 TEX45Q8NA69 505 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 NUDCD2Q8WVJ2 157 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 ACOT12Q8WYK0 555 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 TMEM68Q96MH6 324 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 TINAGL1Q9GZM7 467 aaPredicted RBP7.83□□□□□ -1.16
LDLR-214ENST00000560628 OR51E2Q9H255 320 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 ADAM30Q9UKF2 790 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 STUB1Q9UNE7 303 aa7.83□□□□□ -1.16
LDLR-214ENST00000560628 IGKV1D-13A0A0B4J2D9 117 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 MPPED1O15442 326 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 SSX5O60225 188 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 CTXN2P0C2S0 81 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 IGKV1-13P0DP09 117 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 SDC2P34741 201 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 GNG2P59768 71 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 RPL30P62888 115 aaKnown RBP7.82□□□□□ -1.16
LDLR-214ENST00000560628 MXD1Q05195 221 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 DYRK1AQ13627 763 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 ZNF343Q6P1L6 599 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 IL34Q6ZMJ4 242 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 TPRA1Q86W33 373 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 ZNF645Q8N7E2 425 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 ADAD2Q8NCV1 583 aaKnown RBP7.82□□□□□ -1.16
LDLR-214ENST00000560628 LGALS14Q8TCE9 139 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 CENPOQ9BU64 300 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 Q9H521 79 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 RNF167Q9H6Y7 350 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 ZNF430Q9H8G1 570 aaPredicted RBP7.82□□□□□ -1.16
LDLR-214ENST00000560628 PEF1Q9UBV8 284 aaKnown RBP7.82□□□□□ -1.16
LDLR-214ENST00000560628 OR2W1Q9Y3N9 320 aa7.82□□□□□ -1.16
LDLR-214ENST00000560628 TRAV18A0A075B6X5 111 aa7.81□□□□□ -1.16
LDLR-214ENST00000560628 ACTL6BO94805 426 aa7.81□□□□□ -1.16
LDLR-214ENST00000560628 IGLV1-51P01701 117 aa7.81□□□□□ -1.16
LDLR-214ENST00000560628 IGLV2-14P01704 120 aa7.81□□□□□ -1.16
LDLR-214ENST00000560628 HLA-DQB1P01920 261 aa7.81□□□□□ -1.16
LDLR-214ENST00000560628 FCER2P06734 321 aa7.81□□□□□ -1.16
LDLR-214ENST00000560628 OR9G9P0C7N8 305 aa7.81□□□□□ -1.16
LDLR-214ENST00000560628 SAA1P0DJI8 122 aaPredicted RBP7.81□□□□□ -1.16
LDLR-214ENST00000560628 PTHLHP12272 177 aa7.81□□□□□ -1.16
LDLR-214ENST00000560628 AADACP22760 399 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms